Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24619 | 74080;74081;74082 | chr2:178572277;178572276;178572275 | chr2:179437004;179437003;179437002 |
N2AB | 22978 | 69157;69158;69159 | chr2:178572277;178572276;178572275 | chr2:179437004;179437003;179437002 |
N2A | 22051 | 66376;66377;66378 | chr2:178572277;178572276;178572275 | chr2:179437004;179437003;179437002 |
N2B | 15554 | 46885;46886;46887 | chr2:178572277;178572276;178572275 | chr2:179437004;179437003;179437002 |
Novex-1 | 15679 | 47260;47261;47262 | chr2:178572277;178572276;178572275 | chr2:179437004;179437003;179437002 |
Novex-2 | 15746 | 47461;47462;47463 | chr2:178572277;178572276;178572275 | chr2:179437004;179437003;179437002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.895 | 0.5 | 0.545519808136 | gnomAD-4.0.0 | 1.59284E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86105E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2189 | likely_benign | 0.1953 | benign | -1.774 | Destabilizing | 1.0 | D | 0.844 | deleterious | N | 0.487403746 | None | None | N |
P/C | 0.8354 | likely_pathogenic | 0.8023 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/D | 0.9895 | likely_pathogenic | 0.9856 | pathogenic | -2.408 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/E | 0.9316 | likely_pathogenic | 0.9136 | pathogenic | -2.385 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/F | 0.9507 | likely_pathogenic | 0.9246 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
P/G | 0.8884 | likely_pathogenic | 0.8725 | pathogenic | -2.104 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/H | 0.8644 | likely_pathogenic | 0.8287 | pathogenic | -1.566 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.52637002 | None | None | N |
P/I | 0.791 | likely_pathogenic | 0.731 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
P/K | 0.9556 | likely_pathogenic | 0.9474 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/L | 0.5982 | likely_pathogenic | 0.5283 | ambiguous | -0.939 | Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.537472836 | None | None | N |
P/M | 0.816 | likely_pathogenic | 0.7668 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
P/N | 0.9582 | likely_pathogenic | 0.9454 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
P/Q | 0.7905 | likely_pathogenic | 0.7448 | pathogenic | -1.619 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
P/R | 0.8961 | likely_pathogenic | 0.8738 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.913 | deleterious | N | 0.501971888 | None | None | N |
P/S | 0.5623 | ambiguous | 0.5037 | ambiguous | -1.883 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.471586275 | None | None | N |
P/T | 0.6451 | likely_pathogenic | 0.5635 | ambiguous | -1.758 | Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.502732357 | None | None | N |
P/V | 0.6258 | likely_pathogenic | 0.557 | ambiguous | -1.187 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/W | 0.9864 | likely_pathogenic | 0.9776 | pathogenic | -1.636 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/Y | 0.9568 | likely_pathogenic | 0.9345 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.