Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24624 | 74095;74096;74097 | chr2:178572262;178572261;178572260 | chr2:179436989;179436988;179436987 |
N2AB | 22983 | 69172;69173;69174 | chr2:178572262;178572261;178572260 | chr2:179436989;179436988;179436987 |
N2A | 22056 | 66391;66392;66393 | chr2:178572262;178572261;178572260 | chr2:179436989;179436988;179436987 |
N2B | 15559 | 46900;46901;46902 | chr2:178572262;178572261;178572260 | chr2:179436989;179436988;179436987 |
Novex-1 | 15684 | 47275;47276;47277 | chr2:178572262;178572261;178572260 | chr2:179436989;179436988;179436987 |
Novex-2 | 15751 | 47476;47477;47478 | chr2:178572262;178572261;178572260 | chr2:179436989;179436988;179436987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.998 | N | 0.806 | 0.43 | 0.560153176789 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1102 | likely_benign | 0.1038 | benign | -0.733 | Destabilizing | 0.514 | D | 0.471 | neutral | N | 0.518905663 | None | None | N |
T/C | 0.4129 | ambiguous | 0.4266 | ambiguous | -0.494 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/D | 0.6128 | likely_pathogenic | 0.5894 | pathogenic | 0.215 | Stabilizing | 0.987 | D | 0.745 | deleterious | None | None | None | None | N |
T/E | 0.5265 | ambiguous | 0.4858 | ambiguous | 0.259 | Stabilizing | 0.996 | D | 0.747 | deleterious | None | None | None | None | N |
T/F | 0.2705 | likely_benign | 0.2253 | benign | -0.808 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
T/G | 0.314 | likely_benign | 0.3115 | benign | -1.015 | Destabilizing | 0.994 | D | 0.644 | neutral | None | None | None | None | N |
T/H | 0.2868 | likely_benign | 0.2828 | benign | -1.196 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
T/I | 0.158 | likely_benign | 0.1344 | benign | -0.069 | Destabilizing | 0.998 | D | 0.806 | deleterious | N | 0.518348303 | None | None | N |
T/K | 0.3607 | ambiguous | 0.3524 | ambiguous | -0.432 | Destabilizing | 0.997 | D | 0.749 | deleterious | None | None | None | None | N |
T/L | 0.1096 | likely_benign | 0.0971 | benign | -0.069 | Destabilizing | 0.995 | D | 0.625 | neutral | None | None | None | None | N |
T/M | 0.0949 | likely_benign | 0.0861 | benign | -0.045 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/N | 0.1495 | likely_benign | 0.1507 | benign | -0.553 | Destabilizing | 0.982 | D | 0.625 | neutral | N | 0.51028618 | None | None | N |
T/P | 0.6895 | likely_pathogenic | 0.696 | pathogenic | -0.257 | Destabilizing | 0.991 | D | 0.809 | deleterious | N | 0.51556992 | None | None | N |
T/Q | 0.3038 | likely_benign | 0.2958 | benign | -0.558 | Destabilizing | 0.997 | D | 0.817 | deleterious | None | None | None | None | N |
T/R | 0.3005 | likely_benign | 0.2892 | benign | -0.351 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
T/S | 0.1172 | likely_benign | 0.1133 | benign | -0.881 | Destabilizing | 0.166 | N | 0.225 | neutral | N | 0.487483891 | None | None | N |
T/V | 0.1268 | likely_benign | 0.1111 | benign | -0.257 | Destabilizing | 0.993 | D | 0.524 | neutral | None | None | None | None | N |
T/W | 0.7124 | likely_pathogenic | 0.6882 | pathogenic | -0.798 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
T/Y | 0.3421 | ambiguous | 0.3193 | benign | -0.508 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.