Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24625 | 74098;74099;74100 | chr2:178572259;178572258;178572257 | chr2:179436986;179436985;179436984 |
N2AB | 22984 | 69175;69176;69177 | chr2:178572259;178572258;178572257 | chr2:179436986;179436985;179436984 |
N2A | 22057 | 66394;66395;66396 | chr2:178572259;178572258;178572257 | chr2:179436986;179436985;179436984 |
N2B | 15560 | 46903;46904;46905 | chr2:178572259;178572258;178572257 | chr2:179436986;179436985;179436984 |
Novex-1 | 15685 | 47278;47279;47280 | chr2:178572259;178572258;178572257 | chr2:179436986;179436985;179436984 |
Novex-2 | 15752 | 47479;47480;47481 | chr2:178572259;178572258;178572257 | chr2:179436986;179436985;179436984 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs545556079 | -0.827 | 0.995 | N | 0.771 | 0.261 | 0.570999777189 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/M | rs545556079 | -0.827 | 0.995 | N | 0.771 | 0.261 | 0.570999777189 | gnomAD-4.0.0 | 1.36886E-06 | None | None | None | None | N | None | 0 | 4.47427E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | None | None | 0.102 | N | 0.383 | 0.042 | 0.218845423259 | gnomAD-4.0.0 | 6.84428E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16007E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7451 | likely_pathogenic | 0.6872 | pathogenic | -2.039 | Highly Destabilizing | 0.997 | D | 0.667 | neutral | None | None | None | None | N |
L/C | 0.7943 | likely_pathogenic | 0.7813 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/D | 0.9938 | likely_pathogenic | 0.9915 | pathogenic | -1.248 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/E | 0.9625 | likely_pathogenic | 0.9486 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/F | 0.607 | likely_pathogenic | 0.5156 | ambiguous | -1.27 | Destabilizing | 0.998 | D | 0.773 | deleterious | N | 0.468517948 | None | None | N |
L/G | 0.9593 | likely_pathogenic | 0.9456 | pathogenic | -2.461 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/H | 0.8888 | likely_pathogenic | 0.8527 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/I | 0.129 | likely_benign | 0.1197 | benign | -0.901 | Destabilizing | 0.81 | D | 0.592 | neutral | None | None | None | None | N |
L/K | 0.9167 | likely_pathogenic | 0.8993 | pathogenic | -1.496 | Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
L/M | 0.2506 | likely_benign | 0.2254 | benign | -0.846 | Destabilizing | 0.995 | D | 0.771 | deleterious | N | 0.479815482 | None | None | N |
L/N | 0.9548 | likely_pathogenic | 0.9429 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/P | 0.8262 | likely_pathogenic | 0.7386 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/Q | 0.8592 | likely_pathogenic | 0.8015 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/R | 0.8761 | likely_pathogenic | 0.8381 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/S | 0.9263 | likely_pathogenic | 0.8862 | pathogenic | -2.283 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | N | 0.486398848 | None | None | N |
L/T | 0.7428 | likely_pathogenic | 0.6915 | pathogenic | -2.037 | Highly Destabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | N |
L/V | 0.1002 | likely_benign | 0.0909 | benign | -1.252 | Destabilizing | 0.102 | N | 0.383 | neutral | N | 0.400496838 | None | None | N |
L/W | 0.8557 | likely_pathogenic | 0.8036 | pathogenic | -1.349 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.505263571 | None | None | N |
L/Y | 0.9027 | likely_pathogenic | 0.87 | pathogenic | -1.14 | Destabilizing | 0.997 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.