Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24628 | 74107;74108;74109 | chr2:178572250;178572249;178572248 | chr2:179436977;179436976;179436975 |
N2AB | 22987 | 69184;69185;69186 | chr2:178572250;178572249;178572248 | chr2:179436977;179436976;179436975 |
N2A | 22060 | 66403;66404;66405 | chr2:178572250;178572249;178572248 | chr2:179436977;179436976;179436975 |
N2B | 15563 | 46912;46913;46914 | chr2:178572250;178572249;178572248 | chr2:179436977;179436976;179436975 |
Novex-1 | 15688 | 47287;47288;47289 | chr2:178572250;178572249;178572248 | chr2:179436977;179436976;179436975 |
Novex-2 | 15755 | 47488;47489;47490 | chr2:178572250;178572249;178572248 | chr2:179436977;179436976;179436975 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1277357050 | -1.515 | 0.998 | N | 0.472 | 0.363 | 0.626300511109 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs1277357050 | -1.515 | 0.998 | N | 0.472 | 0.363 | 0.626300511109 | gnomAD-4.0.0 | 1.59224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7415 | likely_pathogenic | 0.6576 | pathogenic | -1.657 | Destabilizing | 0.998 | D | 0.472 | neutral | N | 0.475246806 | None | None | N |
V/C | 0.9381 | likely_pathogenic | 0.936 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9811 | likely_pathogenic | 0.9747 | pathogenic | -1.889 | Destabilizing | 1.0 | D | 0.866 | deleterious | N | 0.50843035 | None | None | N |
V/E | 0.9462 | likely_pathogenic | 0.9192 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
V/F | 0.7926 | likely_pathogenic | 0.7219 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.822 | deleterious | N | 0.494556057 | None | None | N |
V/G | 0.8578 | likely_pathogenic | 0.8163 | pathogenic | -1.986 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.512406822 | None | None | N |
V/H | 0.9809 | likely_pathogenic | 0.9749 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
V/I | 0.1083 | likely_benign | 0.0956 | benign | -0.828 | Destabilizing | 0.297 | N | 0.289 | neutral | N | 0.490140194 | None | None | N |
V/K | 0.9306 | likely_pathogenic | 0.9155 | pathogenic | -1.295 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/L | 0.7935 | likely_pathogenic | 0.7163 | pathogenic | -0.828 | Destabilizing | 0.867 | D | 0.399 | neutral | N | 0.478018283 | None | None | N |
V/M | 0.5084 | ambiguous | 0.3984 | ambiguous | -0.982 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/N | 0.9261 | likely_pathogenic | 0.9014 | pathogenic | -1.325 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
V/P | 0.9941 | likely_pathogenic | 0.9946 | pathogenic | -1.073 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
V/Q | 0.9186 | likely_pathogenic | 0.8781 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/R | 0.9132 | likely_pathogenic | 0.8926 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/S | 0.8247 | likely_pathogenic | 0.7725 | pathogenic | -1.918 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/T | 0.5724 | likely_pathogenic | 0.5287 | ambiguous | -1.756 | Destabilizing | 0.995 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9943 | likely_pathogenic | 0.9924 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/Y | 0.9684 | likely_pathogenic | 0.9564 | pathogenic | -1.263 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.