Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24629 | 74110;74111;74112 | chr2:178572247;178572246;178572245 | chr2:179436974;179436973;179436972 |
N2AB | 22988 | 69187;69188;69189 | chr2:178572247;178572246;178572245 | chr2:179436974;179436973;179436972 |
N2A | 22061 | 66406;66407;66408 | chr2:178572247;178572246;178572245 | chr2:179436974;179436973;179436972 |
N2B | 15564 | 46915;46916;46917 | chr2:178572247;178572246;178572245 | chr2:179436974;179436973;179436972 |
Novex-1 | 15689 | 47290;47291;47292 | chr2:178572247;178572246;178572245 | chr2:179436974;179436973;179436972 |
Novex-2 | 15756 | 47491;47492;47493 | chr2:178572247;178572246;178572245 | chr2:179436974;179436973;179436972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1708480217 | None | 0.039 | N | 0.197 | 0.253 | 0.192905019026 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06697E-04 | 0 |
T/A | rs1708480217 | None | 0.039 | N | 0.197 | 0.253 | 0.192905019026 | gnomAD-4.0.0 | 4.9589E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.78542E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.5572 | ambiguous | 0.519 | ambiguous | -0.629 | Destabilizing | 0.039 | N | 0.197 | neutral | N | 0.485161534 | None | None | N |
T/C | 0.8817 | likely_pathogenic | 0.873 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.505 | neutral | None | None | None | None | N |
T/D | 0.8269 | likely_pathogenic | 0.8139 | pathogenic | -1.624 | Destabilizing | 0.978 | D | 0.471 | neutral | None | None | None | None | N |
T/E | 0.9054 | likely_pathogenic | 0.8928 | pathogenic | -1.604 | Destabilizing | 0.993 | D | 0.464 | neutral | None | None | None | None | N |
T/F | 0.9171 | likely_pathogenic | 0.8866 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.588 | neutral | None | None | None | None | N |
T/G | 0.4828 | ambiguous | 0.458 | ambiguous | -0.865 | Destabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | N |
T/H | 0.7407 | likely_pathogenic | 0.7108 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | N |
T/I | 0.9624 | likely_pathogenic | 0.95 | pathogenic | -0.089 | Destabilizing | 0.997 | D | 0.516 | neutral | N | 0.5038749 | None | None | N |
T/K | 0.7489 | likely_pathogenic | 0.7335 | pathogenic | -0.804 | Destabilizing | 0.994 | D | 0.473 | neutral | N | 0.488528896 | None | None | N |
T/L | 0.6567 | likely_pathogenic | 0.5961 | pathogenic | -0.089 | Destabilizing | 0.983 | D | 0.443 | neutral | None | None | None | None | N |
T/M | 0.4778 | ambiguous | 0.4099 | ambiguous | 0.264 | Stabilizing | 1.0 | D | 0.507 | neutral | None | None | None | None | N |
T/N | 0.3996 | ambiguous | 0.3948 | ambiguous | -1.097 | Destabilizing | 0.978 | D | 0.501 | neutral | None | None | None | None | N |
T/P | 0.9235 | likely_pathogenic | 0.9173 | pathogenic | -0.239 | Destabilizing | 0.985 | D | 0.522 | neutral | N | 0.521979155 | None | None | N |
T/Q | 0.7019 | likely_pathogenic | 0.6823 | pathogenic | -1.368 | Destabilizing | 0.995 | D | 0.519 | neutral | None | None | None | None | N |
T/R | 0.7271 | likely_pathogenic | 0.7094 | pathogenic | -0.494 | Destabilizing | 0.999 | D | 0.525 | neutral | N | 0.47699478 | None | None | N |
T/S | 0.2005 | likely_benign | 0.1838 | benign | -1.133 | Destabilizing | 0.106 | N | 0.273 | neutral | N | 0.491815062 | None | None | N |
T/V | 0.8922 | likely_pathogenic | 0.8718 | pathogenic | -0.239 | Destabilizing | 0.976 | D | 0.435 | neutral | None | None | None | None | N |
T/W | 0.9775 | likely_pathogenic | 0.9666 | pathogenic | -0.957 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
T/Y | 0.9028 | likely_pathogenic | 0.8779 | pathogenic | -0.603 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.