Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24631 | 74116;74117;74118 | chr2:178572241;178572240;178572239 | chr2:179436968;179436967;179436966 |
N2AB | 22990 | 69193;69194;69195 | chr2:178572241;178572240;178572239 | chr2:179436968;179436967;179436966 |
N2A | 22063 | 66412;66413;66414 | chr2:178572241;178572240;178572239 | chr2:179436968;179436967;179436966 |
N2B | 15566 | 46921;46922;46923 | chr2:178572241;178572240;178572239 | chr2:179436968;179436967;179436966 |
Novex-1 | 15691 | 47296;47297;47298 | chr2:178572241;178572240;178572239 | chr2:179436968;179436967;179436966 |
Novex-2 | 15758 | 47497;47498;47499 | chr2:178572241;178572240;178572239 | chr2:179436968;179436967;179436966 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.989 | N | 0.597 | 0.336 | 0.608896402506 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3232 | likely_benign | 0.3197 | benign | -0.665 | Destabilizing | 0.532 | D | 0.501 | neutral | None | None | None | None | N |
N/C | 0.3672 | ambiguous | 0.3547 | ambiguous | 0.195 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
N/D | 0.1754 | likely_benign | 0.1799 | benign | -0.467 | Destabilizing | 0.841 | D | 0.528 | neutral | N | 0.471285075 | None | None | N |
N/E | 0.4284 | ambiguous | 0.4541 | ambiguous | -0.488 | Destabilizing | 0.959 | D | 0.486 | neutral | None | None | None | None | N |
N/F | 0.601 | likely_pathogenic | 0.5722 | pathogenic | -1.023 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
N/G | 0.3498 | ambiguous | 0.3546 | ambiguous | -0.848 | Destabilizing | 0.983 | D | 0.494 | neutral | None | None | None | None | N |
N/H | 0.1087 | likely_benign | 0.1116 | benign | -0.912 | Destabilizing | 0.998 | D | 0.491 | neutral | N | 0.483697011 | None | None | N |
N/I | 0.442 | ambiguous | 0.4115 | ambiguous | -0.256 | Destabilizing | 0.989 | D | 0.597 | neutral | N | 0.489134326 | None | None | N |
N/K | 0.3076 | likely_benign | 0.3457 | ambiguous | 0.032 | Stabilizing | 0.985 | D | 0.485 | neutral | N | 0.516577434 | None | None | N |
N/L | 0.3538 | ambiguous | 0.3479 | ambiguous | -0.256 | Destabilizing | 0.97 | D | 0.511 | neutral | None | None | None | None | N |
N/M | 0.3876 | ambiguous | 0.3915 | ambiguous | 0.457 | Stabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
N/P | 0.9238 | likely_pathogenic | 0.9249 | pathogenic | -0.367 | Destabilizing | 0.993 | D | 0.566 | neutral | None | None | None | None | N |
N/Q | 0.3225 | likely_benign | 0.3486 | ambiguous | -0.683 | Destabilizing | 0.996 | D | 0.474 | neutral | None | None | None | None | N |
N/R | 0.3745 | ambiguous | 0.3913 | ambiguous | 0.198 | Stabilizing | 0.998 | D | 0.466 | neutral | None | None | None | None | N |
N/S | 0.0922 | likely_benign | 0.0948 | benign | -0.348 | Destabilizing | 0.172 | N | 0.191 | neutral | N | 0.433073403 | None | None | N |
N/T | 0.1287 | likely_benign | 0.1326 | benign | -0.224 | Destabilizing | 0.044 | N | 0.107 | neutral | N | 0.420794752 | None | None | N |
N/V | 0.4115 | ambiguous | 0.3918 | ambiguous | -0.367 | Destabilizing | 0.905 | D | 0.491 | neutral | None | None | None | None | N |
N/W | 0.8318 | likely_pathogenic | 0.8191 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/Y | 0.2119 | likely_benign | 0.2018 | benign | -0.633 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.489134326 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.