Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24635 | 74128;74129;74130 | chr2:178572229;178572228;178572227 | chr2:179436956;179436955;179436954 |
N2AB | 22994 | 69205;69206;69207 | chr2:178572229;178572228;178572227 | chr2:179436956;179436955;179436954 |
N2A | 22067 | 66424;66425;66426 | chr2:178572229;178572228;178572227 | chr2:179436956;179436955;179436954 |
N2B | 15570 | 46933;46934;46935 | chr2:178572229;178572228;178572227 | chr2:179436956;179436955;179436954 |
Novex-1 | 15695 | 47308;47309;47310 | chr2:178572229;178572228;178572227 | chr2:179436956;179436955;179436954 |
Novex-2 | 15762 | 47509;47510;47511 | chr2:178572229;178572228;178572227 | chr2:179436956;179436955;179436954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs757091463 | -1.204 | 0.998 | N | 0.571 | 0.335 | 0.461144880706 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
L/V | rs757091463 | -1.204 | 0.998 | N | 0.571 | 0.335 | 0.461144880706 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs757091463 | -1.204 | 0.998 | N | 0.571 | 0.335 | 0.461144880706 | gnomAD-4.0.0 | 2.56348E-06 | None | None | None | None | N | None | 0 | 1.69555E-05 | None | 0 | 0 | None | 0 | 0 | 2.39396E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9752 | likely_pathogenic | 0.9754 | pathogenic | -2.564 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/C | 0.9567 | likely_pathogenic | 0.9579 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.172 | Highly Destabilizing | 1.0 | D | 0.945 | deleterious | None | None | None | None | N |
L/E | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -2.827 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
L/F | 0.6282 | likely_pathogenic | 0.5495 | ambiguous | -1.546 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.51637743 | None | None | N |
L/G | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -3.209 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/H | 0.9967 | likely_pathogenic | 0.9962 | pathogenic | -3.078 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.558968723 | None | None | N |
L/I | 0.1538 | likely_benign | 0.1555 | benign | -0.624 | Destabilizing | 0.997 | D | 0.549 | neutral | D | 0.527760007 | None | None | N |
L/K | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -1.912 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/M | 0.4167 | ambiguous | 0.4016 | ambiguous | -0.882 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/N | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.662 | Highly Destabilizing | 1.0 | D | 0.948 | deleterious | None | None | None | None | N |
L/P | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.949 | deleterious | D | 0.558968723 | None | None | N |
L/Q | 0.9965 | likely_pathogenic | 0.9961 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.944 | deleterious | None | None | None | None | N |
L/R | 0.9954 | likely_pathogenic | 0.9949 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | D | 0.558968723 | None | None | N |
L/S | 0.9979 | likely_pathogenic | 0.9977 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
L/T | 0.9888 | likely_pathogenic | 0.9885 | pathogenic | -2.715 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/V | 0.2533 | likely_benign | 0.2584 | benign | -1.262 | Destabilizing | 0.998 | D | 0.571 | neutral | N | 0.473182891 | None | None | N |
L/W | 0.9849 | likely_pathogenic | 0.9796 | pathogenic | -1.948 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/Y | 0.9834 | likely_pathogenic | 0.9793 | pathogenic | -1.711 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.