Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2464 | 7615;7616;7617 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
N2AB | 2464 | 7615;7616;7617 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
N2A | 2464 | 7615;7616;7617 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
N2B | 2418 | 7477;7478;7479 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
Novex-1 | 2418 | 7477;7478;7479 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
Novex-2 | 2418 | 7477;7478;7479 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
Novex-3 | 2464 | 7615;7616;7617 | chr2:178773666;178773665;178773664 | chr2:179638393;179638392;179638391 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | D | 0.858 | 0.852 | 0.926469043632 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8443 | likely_pathogenic | 0.827 | pathogenic | -2.554 | Highly Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
L/C | 0.8203 | likely_pathogenic | 0.7967 | pathogenic | -1.763 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/D | 0.998 | likely_pathogenic | 0.9976 | pathogenic | -3.43 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/E | 0.9858 | likely_pathogenic | 0.9839 | pathogenic | -3.144 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/F | 0.1192 | likely_benign | 0.1129 | benign | -1.647 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.512858401 | None | None | N |
L/G | 0.9708 | likely_pathogenic | 0.967 | pathogenic | -3.09 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/H | 0.9333 | likely_pathogenic | 0.9244 | pathogenic | -2.673 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.770609436 | None | None | N |
L/I | 0.178 | likely_benign | 0.17 | benign | -0.95 | Destabilizing | 0.999 | D | 0.605 | neutral | D | 0.660348623 | None | None | N |
L/K | 0.9753 | likely_pathogenic | 0.9731 | pathogenic | -2.132 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/M | 0.147 | likely_benign | 0.1416 | benign | -0.958 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/N | 0.9878 | likely_pathogenic | 0.9858 | pathogenic | -2.763 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/P | 0.9887 | likely_pathogenic | 0.9885 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.770609436 | None | None | N |
L/Q | 0.9292 | likely_pathogenic | 0.9224 | pathogenic | -2.506 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/R | 0.952 | likely_pathogenic | 0.9477 | pathogenic | -2.085 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.770609436 | None | None | N |
L/S | 0.9629 | likely_pathogenic | 0.9565 | pathogenic | -3.279 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/T | 0.9093 | likely_pathogenic | 0.8964 | pathogenic | -2.843 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/V | 0.2287 | likely_benign | 0.2172 | benign | -1.475 | Destabilizing | 0.999 | D | 0.63 | neutral | D | 0.735169275 | None | None | N |
L/W | 0.629 | likely_pathogenic | 0.6085 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/Y | 0.7416 | likely_pathogenic | 0.7201 | pathogenic | -1.758 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.