Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24650 | 74173;74174;74175 | chr2:178572184;178572183;178572182 | chr2:179436911;179436910;179436909 |
N2AB | 23009 | 69250;69251;69252 | chr2:178572184;178572183;178572182 | chr2:179436911;179436910;179436909 |
N2A | 22082 | 66469;66470;66471 | chr2:178572184;178572183;178572182 | chr2:179436911;179436910;179436909 |
N2B | 15585 | 46978;46979;46980 | chr2:178572184;178572183;178572182 | chr2:179436911;179436910;179436909 |
Novex-1 | 15710 | 47353;47354;47355 | chr2:178572184;178572183;178572182 | chr2:179436911;179436910;179436909 |
Novex-2 | 15777 | 47554;47555;47556 | chr2:178572184;178572183;178572182 | chr2:179436911;179436910;179436909 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.998 | N | 0.824 | 0.539 | 0.468586609112 | gnomAD-4.0.0 | 3.18425E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2287 | likely_benign | 0.1937 | benign | -0.587 | Destabilizing | 0.204 | N | 0.439 | neutral | N | 0.473591419 | None | None | N |
G/C | 0.3242 | likely_benign | 0.3011 | benign | -0.75 | Destabilizing | 1.0 | D | 0.919 | deleterious | N | 0.496268031 | None | None | N |
G/D | 0.763 | likely_pathogenic | 0.7292 | pathogenic | -1.3 | Destabilizing | 0.998 | D | 0.824 | deleterious | N | 0.492936669 | None | None | N |
G/E | 0.7699 | likely_pathogenic | 0.7478 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
G/F | 0.8729 | likely_pathogenic | 0.8612 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
G/H | 0.6974 | likely_pathogenic | 0.6646 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
G/I | 0.85 | likely_pathogenic | 0.8436 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
G/K | 0.8895 | likely_pathogenic | 0.8733 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
G/L | 0.7915 | likely_pathogenic | 0.7689 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
G/M | 0.8226 | likely_pathogenic | 0.8084 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
G/N | 0.5501 | ambiguous | 0.5327 | ambiguous | -0.896 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/P | 0.998 | likely_pathogenic | 0.9975 | pathogenic | -0.09 | Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
G/Q | 0.7108 | likely_pathogenic | 0.6844 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
G/R | 0.794 | likely_pathogenic | 0.7603 | pathogenic | -0.957 | Destabilizing | 0.999 | D | 0.907 | deleterious | N | 0.494631735 | None | None | N |
G/S | 0.1585 | likely_benign | 0.1441 | benign | -1.206 | Destabilizing | 0.718 | D | 0.433 | neutral | N | 0.471981577 | None | None | N |
G/T | 0.4836 | ambiguous | 0.4564 | ambiguous | -1.074 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
G/V | 0.7286 | likely_pathogenic | 0.7088 | pathogenic | -0.09 | Destabilizing | 0.999 | D | 0.887 | deleterious | D | 0.540754973 | None | None | N |
G/W | 0.8181 | likely_pathogenic | 0.7763 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
G/Y | 0.7332 | likely_pathogenic | 0.7139 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.