Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24652 | 74179;74180;74181 | chr2:178572178;178572177;178572176 | chr2:179436905;179436904;179436903 |
N2AB | 23011 | 69256;69257;69258 | chr2:178572178;178572177;178572176 | chr2:179436905;179436904;179436903 |
N2A | 22084 | 66475;66476;66477 | chr2:178572178;178572177;178572176 | chr2:179436905;179436904;179436903 |
N2B | 15587 | 46984;46985;46986 | chr2:178572178;178572177;178572176 | chr2:179436905;179436904;179436903 |
Novex-1 | 15712 | 47359;47360;47361 | chr2:178572178;178572177;178572176 | chr2:179436905;179436904;179436903 |
Novex-2 | 15779 | 47560;47561;47562 | chr2:178572178;178572177;178572176 | chr2:179436905;179436904;179436903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs760045336 | -1.563 | 0.988 | N | 0.548 | 0.332 | 0.622623412334 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 2.2941E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/F | rs760045336 | -1.563 | 0.988 | N | 0.548 | 0.332 | 0.622623412334 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/F | rs760045336 | -1.563 | 0.988 | N | 0.548 | 0.332 | 0.622623412334 | gnomAD-4.0.0 | 5.12675E-06 | None | None | None | None | N | None | 3.38318E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.7878E-06 | 0 | 0 |
I/L | None | None | 0.266 | N | 0.438 | 0.122 | 0.583365392187 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
I/N | None | None | 0.286 | N | 0.585 | 0.278 | 0.663445045466 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
I/N | None | None | 0.286 | N | 0.585 | 0.278 | 0.663445045466 | gnomAD-4.0.0 | 6.57454E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
I/S | rs377752584 | -2.305 | 0.968 | N | 0.6 | 0.303 | 0.739879714019 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/S | rs377752584 | -2.305 | 0.968 | N | 0.6 | 0.303 | 0.739879714019 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | N | None | 0 | 2.23694E-05 | None | 0 | 0 | None | 0 | 0 | 8.99582E-07 | 0 | 0 |
I/T | rs377752584 | -2.036 | 0.9 | N | 0.544 | 0.333 | None | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.29634E-04 | 0 |
I/T | rs377752584 | -2.036 | 0.9 | N | 0.544 | 0.333 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
I/T | rs377752584 | -2.036 | 0.9 | N | 0.544 | 0.333 | None | gnomAD-4.0.0 | 4.95871E-06 | None | None | None | None | N | None | 1.33511E-05 | 0 | None | 3.37883E-05 | 2.23494E-05 | None | 0 | 0 | 4.23865E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2651 | likely_benign | 0.2615 | benign | -2.161 | Highly Destabilizing | 0.975 | D | 0.527 | neutral | None | None | None | None | N |
I/C | 0.6062 | likely_pathogenic | 0.6252 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
I/D | 0.7729 | likely_pathogenic | 0.7836 | pathogenic | -1.931 | Destabilizing | 0.986 | D | 0.673 | neutral | None | None | None | None | N |
I/E | 0.5841 | likely_pathogenic | 0.6134 | pathogenic | -1.852 | Destabilizing | 0.967 | D | 0.676 | prob.neutral | None | None | None | None | N |
I/F | 0.1809 | likely_benign | 0.1814 | benign | -1.436 | Destabilizing | 0.988 | D | 0.548 | neutral | N | 0.512246263 | None | None | N |
I/G | 0.7135 | likely_pathogenic | 0.7167 | pathogenic | -2.562 | Highly Destabilizing | 0.975 | D | 0.637 | neutral | None | None | None | None | N |
I/H | 0.3498 | ambiguous | 0.381 | ambiguous | -1.73 | Destabilizing | 0.107 | N | 0.573 | neutral | None | None | None | None | N |
I/K | 0.2713 | likely_benign | 0.2927 | benign | -1.505 | Destabilizing | 0.804 | D | 0.677 | prob.neutral | None | None | None | None | N |
I/L | 0.1106 | likely_benign | 0.1151 | benign | -1.078 | Destabilizing | 0.266 | N | 0.438 | neutral | N | 0.481749997 | None | None | N |
I/M | 0.1013 | likely_benign | 0.1009 | benign | -1.015 | Destabilizing | 0.987 | D | 0.566 | neutral | N | 0.466102092 | None | None | N |
I/N | 0.2673 | likely_benign | 0.2874 | benign | -1.502 | Destabilizing | 0.286 | N | 0.585 | neutral | N | 0.507531089 | None | None | N |
I/P | 0.9802 | likely_pathogenic | 0.9778 | pathogenic | -1.412 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Q | 0.3506 | ambiguous | 0.3853 | ambiguous | -1.622 | Destabilizing | 0.983 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/R | 0.2001 | likely_benign | 0.2167 | benign | -0.963 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/S | 0.2592 | likely_benign | 0.2747 | benign | -2.203 | Highly Destabilizing | 0.968 | D | 0.6 | neutral | N | 0.520401599 | None | None | N |
I/T | 0.1146 | likely_benign | 0.1142 | benign | -2.0 | Highly Destabilizing | 0.9 | D | 0.544 | neutral | N | 0.484096869 | None | None | N |
I/V | 0.0655 | likely_benign | 0.0645 | benign | -1.412 | Destabilizing | 0.492 | N | 0.441 | neutral | N | 0.436575068 | None | None | N |
I/W | 0.7539 | likely_pathogenic | 0.7389 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
I/Y | 0.4614 | ambiguous | 0.4786 | ambiguous | -1.329 | Destabilizing | 0.765 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.