Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24654 | 74185;74186;74187 | chr2:178572172;178572171;178572170 | chr2:179436899;179436898;179436897 |
N2AB | 23013 | 69262;69263;69264 | chr2:178572172;178572171;178572170 | chr2:179436899;179436898;179436897 |
N2A | 22086 | 66481;66482;66483 | chr2:178572172;178572171;178572170 | chr2:179436899;179436898;179436897 |
N2B | 15589 | 46990;46991;46992 | chr2:178572172;178572171;178572170 | chr2:179436899;179436898;179436897 |
Novex-1 | 15714 | 47365;47366;47367 | chr2:178572172;178572171;178572170 | chr2:179436899;179436898;179436897 |
Novex-2 | 15781 | 47566;47567;47568 | chr2:178572172;178572171;178572170 | chr2:179436899;179436898;179436897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs766830917 | -1.828 | 1.0 | N | 0.745 | 0.436 | 0.351180957027 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8083 | likely_pathogenic | 0.794 | pathogenic | -2.238 | Highly Destabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.529430986 | None | None | N |
E/C | 0.9878 | likely_pathogenic | 0.9864 | pathogenic | -1.265 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/D | 0.7678 | likely_pathogenic | 0.7327 | pathogenic | -1.63 | Destabilizing | 0.998 | D | 0.639 | neutral | N | 0.492982213 | None | None | N |
E/F | 0.9945 | likely_pathogenic | 0.9933 | pathogenic | -1.969 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/G | 0.8988 | likely_pathogenic | 0.8858 | pathogenic | -2.605 | Highly Destabilizing | 1.0 | D | 0.766 | deleterious | D | 0.537953362 | None | None | N |
E/H | 0.9565 | likely_pathogenic | 0.9538 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/I | 0.982 | likely_pathogenic | 0.9793 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
E/K | 0.9281 | likely_pathogenic | 0.9238 | pathogenic | -2.006 | Highly Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.504134254 | None | None | N |
E/L | 0.9774 | likely_pathogenic | 0.9731 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/M | 0.96 | likely_pathogenic | 0.9537 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/N | 0.9418 | likely_pathogenic | 0.9335 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Q | 0.4901 | ambiguous | 0.4723 | ambiguous | -1.83 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.469722943 | None | None | N |
E/R | 0.9516 | likely_pathogenic | 0.9473 | pathogenic | -1.722 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/S | 0.8086 | likely_pathogenic | 0.7948 | pathogenic | -2.833 | Highly Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/T | 0.929 | likely_pathogenic | 0.9203 | pathogenic | -2.481 | Highly Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/V | 0.9421 | likely_pathogenic | 0.9364 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.525583099 | None | None | N |
E/W | 0.9972 | likely_pathogenic | 0.9966 | pathogenic | -1.944 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/Y | 0.9898 | likely_pathogenic | 0.9877 | pathogenic | -1.78 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.