Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24656 | 74191;74192;74193 | chr2:178572166;178572165;178572164 | chr2:179436893;179436892;179436891 |
N2AB | 23015 | 69268;69269;69270 | chr2:178572166;178572165;178572164 | chr2:179436893;179436892;179436891 |
N2A | 22088 | 66487;66488;66489 | chr2:178572166;178572165;178572164 | chr2:179436893;179436892;179436891 |
N2B | 15591 | 46996;46997;46998 | chr2:178572166;178572165;178572164 | chr2:179436893;179436892;179436891 |
Novex-1 | 15716 | 47371;47372;47373 | chr2:178572166;178572165;178572164 | chr2:179436893;179436892;179436891 |
Novex-2 | 15783 | 47572;47573;47574 | chr2:178572166;178572165;178572164 | chr2:179436893;179436892;179436891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs763473286 | -0.2 | 0.999 | N | 0.479 | 0.409 | 0.254244900254 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
Q/K | rs763473286 | -0.2 | 0.999 | N | 0.479 | 0.409 | 0.254244900254 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78211E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.5473 | ambiguous | 0.4661 | ambiguous | -0.972 | Destabilizing | 1.0 | D | 0.501 | neutral | None | None | None | None | N |
Q/C | 0.7388 | likely_pathogenic | 0.6806 | pathogenic | -0.499 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Q/D | 0.9609 | likely_pathogenic | 0.9313 | pathogenic | -1.454 | Destabilizing | 0.999 | D | 0.48 | neutral | None | None | None | None | N |
Q/E | 0.2647 | likely_benign | 0.2194 | benign | -1.288 | Destabilizing | 0.998 | D | 0.421 | neutral | N | 0.486907888 | None | None | N |
Q/F | 0.9397 | likely_pathogenic | 0.9065 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Q/G | 0.7001 | likely_pathogenic | 0.6094 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
Q/H | 0.6382 | likely_pathogenic | 0.5395 | ambiguous | -1.187 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.480322461 | None | None | N |
Q/I | 0.7842 | likely_pathogenic | 0.7247 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Q/K | 0.166 | likely_benign | 0.1416 | benign | -0.322 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.438191221 | None | None | N |
Q/L | 0.2764 | likely_benign | 0.2198 | benign | -0.007 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.509862105 | None | None | N |
Q/M | 0.4812 | ambiguous | 0.4214 | ambiguous | 0.397 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
Q/N | 0.7831 | likely_pathogenic | 0.6969 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
Q/P | 0.9716 | likely_pathogenic | 0.9499 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.502946167 | None | None | N |
Q/R | 0.1779 | likely_benign | 0.1619 | benign | -0.32 | Destabilizing | 0.998 | D | 0.483 | neutral | N | 0.417642591 | None | None | N |
Q/S | 0.7523 | likely_pathogenic | 0.6643 | pathogenic | -1.207 | Destabilizing | 1.0 | D | 0.448 | neutral | None | None | None | None | N |
Q/T | 0.6923 | likely_pathogenic | 0.6113 | pathogenic | -0.85 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
Q/V | 0.6077 | likely_pathogenic | 0.5341 | ambiguous | -0.301 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Q/W | 0.9156 | likely_pathogenic | 0.8646 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Q/Y | 0.859 | likely_pathogenic | 0.7779 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.