Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24667 | 74224;74225;74226 | chr2:178572133;178572132;178572131 | chr2:179436860;179436859;179436858 |
N2AB | 23026 | 69301;69302;69303 | chr2:178572133;178572132;178572131 | chr2:179436860;179436859;179436858 |
N2A | 22099 | 66520;66521;66522 | chr2:178572133;178572132;178572131 | chr2:179436860;179436859;179436858 |
N2B | 15602 | 47029;47030;47031 | chr2:178572133;178572132;178572131 | chr2:179436860;179436859;179436858 |
Novex-1 | 15727 | 47404;47405;47406 | chr2:178572133;178572132;178572131 | chr2:179436860;179436859;179436858 |
Novex-2 | 15794 | 47605;47606;47607 | chr2:178572133;178572132;178572131 | chr2:179436860;179436859;179436858 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.939 | N | 0.538 | 0.155 | 0.283371740733 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4207 | ambiguous | 0.3933 | ambiguous | -0.868 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
A/D | 0.7021 | likely_pathogenic | 0.6238 | pathogenic | -1.02 | Destabilizing | 0.994 | D | 0.648 | neutral | N | 0.496295375 | None | None | N |
A/E | 0.6026 | likely_pathogenic | 0.5214 | ambiguous | -1.105 | Destabilizing | 0.989 | D | 0.597 | neutral | None | None | None | None | N |
A/F | 0.5817 | likely_pathogenic | 0.4918 | ambiguous | -1.062 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/G | 0.235 | likely_benign | 0.2102 | benign | -0.958 | Destabilizing | 0.697 | D | 0.525 | neutral | N | 0.497508884 | None | None | N |
A/H | 0.6892 | likely_pathogenic | 0.6243 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/I | 0.3594 | ambiguous | 0.3015 | benign | -0.432 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
A/K | 0.7082 | likely_pathogenic | 0.6168 | pathogenic | -1.171 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
A/L | 0.261 | likely_benign | 0.2222 | benign | -0.432 | Destabilizing | 0.98 | D | 0.525 | neutral | None | None | None | None | N |
A/M | 0.2493 | likely_benign | 0.2167 | benign | -0.343 | Destabilizing | 0.901 | D | 0.377 | neutral | None | None | None | None | N |
A/N | 0.4418 | ambiguous | 0.3899 | ambiguous | -0.834 | Destabilizing | 0.963 | D | 0.669 | neutral | None | None | None | None | N |
A/P | 0.9595 | likely_pathogenic | 0.935 | pathogenic | -0.504 | Destabilizing | 0.997 | D | 0.662 | neutral | N | 0.465506208 | None | None | N |
A/Q | 0.5107 | ambiguous | 0.4501 | ambiguous | -1.056 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
A/R | 0.6575 | likely_pathogenic | 0.5836 | pathogenic | -0.742 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
A/S | 0.1159 | likely_benign | 0.1057 | benign | -1.11 | Destabilizing | 0.045 | N | 0.371 | neutral | N | 0.487558462 | None | None | N |
A/T | 0.0766 | likely_benign | 0.0744 | benign | -1.108 | Destabilizing | 0.939 | D | 0.538 | neutral | N | 0.445018406 | None | None | N |
A/V | 0.1695 | likely_benign | 0.1441 | benign | -0.504 | Destabilizing | 0.971 | D | 0.529 | neutral | N | 0.479845843 | None | None | N |
A/W | 0.9348 | likely_pathogenic | 0.8981 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
A/Y | 0.721 | likely_pathogenic | 0.6371 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.