Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24668 | 74227;74228;74229 | chr2:178572130;178572129;178572128 | chr2:179436857;179436856;179436855 |
N2AB | 23027 | 69304;69305;69306 | chr2:178572130;178572129;178572128 | chr2:179436857;179436856;179436855 |
N2A | 22100 | 66523;66524;66525 | chr2:178572130;178572129;178572128 | chr2:179436857;179436856;179436855 |
N2B | 15603 | 47032;47033;47034 | chr2:178572130;178572129;178572128 | chr2:179436857;179436856;179436855 |
Novex-1 | 15728 | 47407;47408;47409 | chr2:178572130;178572129;178572128 | chr2:179436857;179436856;179436855 |
Novex-2 | 15795 | 47608;47609;47610 | chr2:178572130;178572129;178572128 | chr2:179436857;179436856;179436855 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs771515164 | 0.199 | 0.665 | N | 0.609 | 0.184 | 0.294918367191 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
T/I | rs771515164 | 0.199 | 0.665 | N | 0.609 | 0.184 | 0.294918367191 | gnomAD-4.0.0 | 6.84429E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99624E-07 | 0 | 0 |
T/R | None | None | 0.949 | N | 0.701 | 0.356 | 0.355034743287 | gnomAD-4.0.0 | 6.84429E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52845E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.078 | likely_benign | 0.0758 | benign | -0.302 | Destabilizing | 0.054 | N | 0.492 | neutral | N | 0.517670725 | None | None | I |
T/C | 0.3731 | ambiguous | 0.3831 | ambiguous | -0.303 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | None | None | None | None | I |
T/D | 0.4542 | ambiguous | 0.4455 | ambiguous | 0.331 | Stabilizing | 0.798 | D | 0.682 | prob.neutral | None | None | None | None | I |
T/E | 0.3257 | likely_benign | 0.3215 | benign | 0.268 | Stabilizing | 0.653 | D | 0.632 | neutral | None | None | None | None | I |
T/F | 0.2315 | likely_benign | 0.2171 | benign | -0.735 | Destabilizing | 0.99 | D | 0.791 | deleterious | None | None | None | None | I |
T/G | 0.2875 | likely_benign | 0.2805 | benign | -0.45 | Destabilizing | 0.904 | D | 0.681 | prob.neutral | None | None | None | None | I |
T/H | 0.2081 | likely_benign | 0.2195 | benign | -0.742 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | I |
T/I | 0.1285 | likely_benign | 0.1182 | benign | -0.034 | Destabilizing | 0.665 | D | 0.609 | neutral | N | 0.464212307 | None | None | I |
T/K | 0.1908 | likely_benign | 0.1905 | benign | -0.314 | Destabilizing | 0.028 | N | 0.337 | neutral | N | 0.484753017 | None | None | I |
T/L | 0.0905 | likely_benign | 0.0863 | benign | -0.034 | Destabilizing | 0.724 | D | 0.599 | neutral | None | None | None | None | I |
T/M | 0.0812 | likely_benign | 0.0786 | benign | 0.02 | Stabilizing | 0.974 | D | 0.72 | prob.delet. | None | None | None | None | I |
T/N | 0.109 | likely_benign | 0.1119 | benign | -0.15 | Destabilizing | 0.798 | D | 0.577 | neutral | None | None | None | None | I |
T/P | 0.2612 | likely_benign | 0.2398 | benign | -0.093 | Destabilizing | 0.858 | D | 0.717 | prob.delet. | N | 0.480963351 | None | None | I |
T/Q | 0.1868 | likely_benign | 0.1947 | benign | -0.337 | Destabilizing | 0.896 | D | 0.725 | prob.delet. | None | None | None | None | I |
T/R | 0.1633 | likely_benign | 0.1615 | benign | -0.095 | Destabilizing | 0.949 | D | 0.701 | prob.neutral | N | 0.46591654 | None | None | I |
T/S | 0.1031 | likely_benign | 0.1045 | benign | -0.374 | Destabilizing | 0.216 | N | 0.486 | neutral | N | 0.474074664 | None | None | I |
T/V | 0.0924 | likely_benign | 0.0875 | benign | -0.093 | Destabilizing | 0.048 | N | 0.219 | neutral | None | None | None | None | I |
T/W | 0.5827 | likely_pathogenic | 0.5831 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | I |
T/Y | 0.2622 | likely_benign | 0.2692 | benign | -0.453 | Destabilizing | 0.997 | D | 0.793 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.