Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24669 | 74230;74231;74232 | chr2:178572127;178572126;178572125 | chr2:179436854;179436853;179436852 |
N2AB | 23028 | 69307;69308;69309 | chr2:178572127;178572126;178572125 | chr2:179436854;179436853;179436852 |
N2A | 22101 | 66526;66527;66528 | chr2:178572127;178572126;178572125 | chr2:179436854;179436853;179436852 |
N2B | 15604 | 47035;47036;47037 | chr2:178572127;178572126;178572125 | chr2:179436854;179436853;179436852 |
Novex-1 | 15729 | 47410;47411;47412 | chr2:178572127;178572126;178572125 | chr2:179436854;179436853;179436852 |
Novex-2 | 15796 | 47611;47612;47613 | chr2:178572127;178572126;178572125 | chr2:179436854;179436853;179436852 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs768046818 | None | 0.484 | N | 0.533 | 0.207 | 0.544303689236 | gnomAD-4.0.0 | 1.02665E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34945E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3133 | likely_benign | 0.2788 | benign | -1.322 | Destabilizing | 0.555 | D | 0.504 | neutral | N | 0.474545109 | None | None | N |
V/C | 0.8212 | likely_pathogenic | 0.7906 | pathogenic | -0.788 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
V/D | 0.905 | likely_pathogenic | 0.8826 | pathogenic | -1.294 | Destabilizing | 0.981 | D | 0.693 | prob.neutral | N | 0.491128427 | None | None | N |
V/E | 0.7998 | likely_pathogenic | 0.768 | pathogenic | -1.172 | Destabilizing | 0.958 | D | 0.615 | neutral | None | None | None | None | N |
V/F | 0.568 | likely_pathogenic | 0.5312 | ambiguous | -0.743 | Destabilizing | 0.996 | D | 0.658 | neutral | N | 0.494170301 | None | None | N |
V/G | 0.42 | ambiguous | 0.3776 | ambiguous | -1.754 | Destabilizing | 0.059 | N | 0.445 | neutral | N | 0.471342331 | None | None | N |
V/H | 0.9326 | likely_pathogenic | 0.9173 | pathogenic | -1.419 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/I | 0.1495 | likely_benign | 0.1397 | benign | -0.189 | Destabilizing | 0.484 | N | 0.533 | neutral | N | 0.49281514 | None | None | N |
V/K | 0.8454 | likely_pathogenic | 0.8203 | pathogenic | -1.057 | Destabilizing | 0.961 | D | 0.629 | neutral | None | None | None | None | N |
V/L | 0.5116 | ambiguous | 0.4885 | ambiguous | -0.189 | Destabilizing | 0.279 | N | 0.54 | neutral | N | 0.474825051 | None | None | N |
V/M | 0.3285 | likely_benign | 0.298 | benign | -0.18 | Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | N |
V/N | 0.7089 | likely_pathogenic | 0.6536 | pathogenic | -1.117 | Destabilizing | 0.784 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/P | 0.9724 | likely_pathogenic | 0.9639 | pathogenic | -0.533 | Destabilizing | 0.957 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/Q | 0.7522 | likely_pathogenic | 0.7138 | pathogenic | -1.084 | Destabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/R | 0.8182 | likely_pathogenic | 0.7895 | pathogenic | -0.809 | Destabilizing | 0.991 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/S | 0.3632 | ambiguous | 0.3174 | benign | -1.706 | Destabilizing | 0.8 | D | 0.611 | neutral | None | None | None | None | N |
V/T | 0.2558 | likely_benign | 0.2278 | benign | -1.456 | Destabilizing | 0.041 | N | 0.331 | neutral | None | None | None | None | N |
V/W | 0.9874 | likely_pathogenic | 0.9827 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/Y | 0.931 | likely_pathogenic | 0.9145 | pathogenic | -0.725 | Destabilizing | 0.997 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.