Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24671 | 74236;74237;74238 | chr2:178572121;178572120;178572119 | chr2:179436848;179436847;179436846 |
N2AB | 23030 | 69313;69314;69315 | chr2:178572121;178572120;178572119 | chr2:179436848;179436847;179436846 |
N2A | 22103 | 66532;66533;66534 | chr2:178572121;178572120;178572119 | chr2:179436848;179436847;179436846 |
N2B | 15606 | 47041;47042;47043 | chr2:178572121;178572120;178572119 | chr2:179436848;179436847;179436846 |
Novex-1 | 15731 | 47416;47417;47418 | chr2:178572121;178572120;178572119 | chr2:179436848;179436847;179436846 |
Novex-2 | 15798 | 47617;47618;47619 | chr2:178572121;178572120;178572119 | chr2:179436848;179436847;179436846 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.25 | N | 0.231 | 0.132 | 0.418344901717 | gnomAD-4.0.0 | 1.59257E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86007E-06 | 0 | 0 |
V/I | rs1708427922 | None | 0.001 | N | 0.131 | 0.112 | 0.391313282164 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1708427922 | None | 0.001 | N | 0.131 | 0.112 | 0.391313282164 | gnomAD-4.0.0 | 9.9187E-06 | None | None | None | None | I | None | 0 | 1.66778E-05 | None | 0 | 0 | None | 0 | 0 | 1.27167E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1219 | likely_benign | 0.1272 | benign | -1.122 | Destabilizing | 0.25 | N | 0.231 | neutral | N | 0.430187814 | None | None | I |
V/C | 0.6311 | likely_pathogenic | 0.6483 | pathogenic | -0.714 | Destabilizing | 0.994 | D | 0.349 | neutral | None | None | None | None | I |
V/D | 0.3117 | likely_benign | 0.2862 | benign | -1.086 | Destabilizing | 0.799 | D | 0.329 | neutral | N | 0.470706285 | None | None | I |
V/E | 0.3203 | likely_benign | 0.2948 | benign | -1.055 | Destabilizing | 0.46 | N | 0.314 | neutral | None | None | None | None | I |
V/F | 0.1814 | likely_benign | 0.1702 | benign | -0.816 | Destabilizing | 0.913 | D | 0.391 | neutral | N | 0.51615336 | None | None | I |
V/G | 0.1249 | likely_benign | 0.1254 | benign | -1.411 | Destabilizing | 0.843 | D | 0.31 | neutral | N | 0.463473668 | None | None | I |
V/H | 0.532 | ambiguous | 0.5121 | ambiguous | -0.728 | Destabilizing | 0.996 | D | 0.365 | neutral | None | None | None | None | I |
V/I | 0.0826 | likely_benign | 0.0835 | benign | -0.424 | Destabilizing | 0.001 | N | 0.131 | neutral | N | 0.501165264 | None | None | I |
V/K | 0.4277 | ambiguous | 0.4024 | ambiguous | -0.9 | Destabilizing | 0.65 | D | 0.31 | neutral | None | None | None | None | I |
V/L | 0.1771 | likely_benign | 0.1786 | benign | -0.424 | Destabilizing | 0.018 | N | 0.273 | neutral | N | 0.49981847 | None | None | I |
V/M | 0.1129 | likely_benign | 0.1154 | benign | -0.482 | Destabilizing | 0.909 | D | 0.383 | neutral | None | None | None | None | I |
V/N | 0.1426 | likely_benign | 0.1421 | benign | -0.889 | Destabilizing | 0.492 | N | 0.354 | neutral | None | None | None | None | I |
V/P | 0.7501 | likely_pathogenic | 0.7379 | pathogenic | -0.624 | Destabilizing | 0.663 | D | 0.351 | neutral | None | None | None | None | I |
V/Q | 0.3284 | likely_benign | 0.3162 | benign | -1.0 | Destabilizing | 0.904 | D | 0.375 | neutral | None | None | None | None | I |
V/R | 0.4681 | ambiguous | 0.4325 | ambiguous | -0.408 | Destabilizing | 0.966 | D | 0.391 | neutral | None | None | None | None | I |
V/S | 0.1165 | likely_benign | 0.1201 | benign | -1.329 | Destabilizing | 0.034 | N | 0.196 | neutral | None | None | None | None | I |
V/T | 0.1034 | likely_benign | 0.1079 | benign | -1.186 | Destabilizing | 0.005 | N | 0.081 | neutral | None | None | None | None | I |
V/W | 0.8502 | likely_pathogenic | 0.836 | pathogenic | -1.022 | Destabilizing | 0.999 | D | 0.425 | neutral | None | None | None | None | I |
V/Y | 0.5238 | ambiguous | 0.5025 | ambiguous | -0.685 | Destabilizing | 0.966 | D | 0.393 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.