Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2467174236;74237;74238 chr2:178572121;178572120;178572119chr2:179436848;179436847;179436846
N2AB2303069313;69314;69315 chr2:178572121;178572120;178572119chr2:179436848;179436847;179436846
N2A2210366532;66533;66534 chr2:178572121;178572120;178572119chr2:179436848;179436847;179436846
N2B1560647041;47042;47043 chr2:178572121;178572120;178572119chr2:179436848;179436847;179436846
Novex-11573147416;47417;47418 chr2:178572121;178572120;178572119chr2:179436848;179436847;179436846
Novex-21579847617;47618;47619 chr2:178572121;178572120;178572119chr2:179436848;179436847;179436846
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTC
  • RefSeq wild type template codon: CAG
  • Domain: Fn3-67
  • Domain position: 56
  • Structural Position: 88
  • Q(SASA): 0.2958
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/A None None 0.25 N 0.231 0.132 0.418344901717 gnomAD-4.0.0 1.59257E-06 None None None None I None 0 0 None 0 0 None 0 0 2.86007E-06 0 0
V/I rs1708427922 None 0.001 N 0.131 0.112 0.391313282164 gnomAD-3.1.2 6.58E-06 None None None None I None 0 6.55E-05 0 0 0 None 0 0 0 0 0
V/I rs1708427922 None 0.001 N 0.131 0.112 0.391313282164 gnomAD-4.0.0 9.9187E-06 None None None None I None 0 1.66778E-05 None 0 0 None 0 0 1.27167E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.1219 likely_benign 0.1272 benign -1.122 Destabilizing 0.25 N 0.231 neutral N 0.430187814 None None I
V/C 0.6311 likely_pathogenic 0.6483 pathogenic -0.714 Destabilizing 0.994 D 0.349 neutral None None None None I
V/D 0.3117 likely_benign 0.2862 benign -1.086 Destabilizing 0.799 D 0.329 neutral N 0.470706285 None None I
V/E 0.3203 likely_benign 0.2948 benign -1.055 Destabilizing 0.46 N 0.314 neutral None None None None I
V/F 0.1814 likely_benign 0.1702 benign -0.816 Destabilizing 0.913 D 0.391 neutral N 0.51615336 None None I
V/G 0.1249 likely_benign 0.1254 benign -1.411 Destabilizing 0.843 D 0.31 neutral N 0.463473668 None None I
V/H 0.532 ambiguous 0.5121 ambiguous -0.728 Destabilizing 0.996 D 0.365 neutral None None None None I
V/I 0.0826 likely_benign 0.0835 benign -0.424 Destabilizing 0.001 N 0.131 neutral N 0.501165264 None None I
V/K 0.4277 ambiguous 0.4024 ambiguous -0.9 Destabilizing 0.65 D 0.31 neutral None None None None I
V/L 0.1771 likely_benign 0.1786 benign -0.424 Destabilizing 0.018 N 0.273 neutral N 0.49981847 None None I
V/M 0.1129 likely_benign 0.1154 benign -0.482 Destabilizing 0.909 D 0.383 neutral None None None None I
V/N 0.1426 likely_benign 0.1421 benign -0.889 Destabilizing 0.492 N 0.354 neutral None None None None I
V/P 0.7501 likely_pathogenic 0.7379 pathogenic -0.624 Destabilizing 0.663 D 0.351 neutral None None None None I
V/Q 0.3284 likely_benign 0.3162 benign -1.0 Destabilizing 0.904 D 0.375 neutral None None None None I
V/R 0.4681 ambiguous 0.4325 ambiguous -0.408 Destabilizing 0.966 D 0.391 neutral None None None None I
V/S 0.1165 likely_benign 0.1201 benign -1.329 Destabilizing 0.034 N 0.196 neutral None None None None I
V/T 0.1034 likely_benign 0.1079 benign -1.186 Destabilizing 0.005 N 0.081 neutral None None None None I
V/W 0.8502 likely_pathogenic 0.836 pathogenic -1.022 Destabilizing 0.999 D 0.425 neutral None None None None I
V/Y 0.5238 ambiguous 0.5025 ambiguous -0.685 Destabilizing 0.966 D 0.393 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.