Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24674 | 74245;74246;74247 | chr2:178572112;178572111;178572110 | chr2:179436839;179436838;179436837 |
N2AB | 23033 | 69322;69323;69324 | chr2:178572112;178572111;178572110 | chr2:179436839;179436838;179436837 |
N2A | 22106 | 66541;66542;66543 | chr2:178572112;178572111;178572110 | chr2:179436839;179436838;179436837 |
N2B | 15609 | 47050;47051;47052 | chr2:178572112;178572111;178572110 | chr2:179436839;179436838;179436837 |
Novex-1 | 15734 | 47425;47426;47427 | chr2:178572112;178572111;178572110 | chr2:179436839;179436838;179436837 |
Novex-2 | 15801 | 47626;47627;47628 | chr2:178572112;178572111;178572110 | chr2:179436839;179436838;179436837 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1158950009 | None | 0.663 | N | 0.449 | 0.257 | 0.414930877219 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.512 | ambiguous | 0.5162 | ambiguous | -0.741 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/D | 0.8876 | likely_pathogenic | 0.8883 | pathogenic | -0.753 | Destabilizing | 0.994 | D | 0.807 | deleterious | N | 0.488982968 | None | None | N |
A/E | 0.8134 | likely_pathogenic | 0.8185 | pathogenic | -0.704 | Destabilizing | 0.997 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/F | 0.645 | likely_pathogenic | 0.6475 | pathogenic | -0.54 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
A/G | 0.2305 | likely_benign | 0.2363 | benign | -0.924 | Destabilizing | 0.815 | D | 0.588 | neutral | N | 0.472600233 | None | None | N |
A/H | 0.8377 | likely_pathogenic | 0.8343 | pathogenic | -1.15 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
A/I | 0.5371 | ambiguous | 0.5643 | pathogenic | 0.196 | Stabilizing | 0.991 | D | 0.699 | prob.neutral | None | None | None | None | N |
A/K | 0.9029 | likely_pathogenic | 0.9088 | pathogenic | -0.872 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/L | 0.4477 | ambiguous | 0.4992 | ambiguous | 0.196 | Stabilizing | 0.991 | D | 0.599 | neutral | None | None | None | None | N |
A/M | 0.3883 | ambiguous | 0.409 | ambiguous | -0.004 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
A/N | 0.7302 | likely_pathogenic | 0.7337 | pathogenic | -0.807 | Destabilizing | 0.961 | D | 0.811 | deleterious | None | None | None | None | N |
A/P | 0.9911 | likely_pathogenic | 0.9916 | pathogenic | -0.021 | Destabilizing | 0.997 | D | 0.783 | deleterious | N | 0.518608113 | None | None | N |
A/Q | 0.7864 | likely_pathogenic | 0.8029 | pathogenic | -0.797 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
A/R | 0.8831 | likely_pathogenic | 0.8921 | pathogenic | -0.763 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
A/S | 0.2066 | likely_benign | 0.2077 | benign | -1.237 | Destabilizing | 0.626 | D | 0.535 | neutral | N | 0.488640573 | None | None | N |
A/T | 0.1471 | likely_benign | 0.1416 | benign | -1.063 | Destabilizing | 0.177 | N | 0.44 | neutral | N | 0.488121396 | None | None | N |
A/V | 0.2518 | likely_benign | 0.2712 | benign | -0.021 | Destabilizing | 0.663 | D | 0.449 | neutral | N | 0.507125658 | None | None | N |
A/W | 0.953 | likely_pathogenic | 0.9519 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
A/Y | 0.7704 | likely_pathogenic | 0.7718 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.