Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24679 | 74260;74261;74262 | chr2:178572097;178572096;178572095 | chr2:179436824;179436823;179436822 |
N2AB | 23038 | 69337;69338;69339 | chr2:178572097;178572096;178572095 | chr2:179436824;179436823;179436822 |
N2A | 22111 | 66556;66557;66558 | chr2:178572097;178572096;178572095 | chr2:179436824;179436823;179436822 |
N2B | 15614 | 47065;47066;47067 | chr2:178572097;178572096;178572095 | chr2:179436824;179436823;179436822 |
Novex-1 | 15739 | 47440;47441;47442 | chr2:178572097;178572096;178572095 | chr2:179436824;179436823;179436822 |
Novex-2 | 15806 | 47641;47642;47643 | chr2:178572097;178572096;178572095 | chr2:179436824;179436823;179436822 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs752890306 | -1.317 | 0.991 | D | 0.828 | 0.629 | 0.844246078639 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
L/I | rs752890306 | -1.317 | 0.991 | D | 0.828 | 0.629 | 0.844246078639 | gnomAD-4.0.0 | 3.18495E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9746 | likely_pathogenic | 0.9767 | pathogenic | -2.383 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/C | 0.9241 | likely_pathogenic | 0.9259 | pathogenic | -1.996 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.998 | likely_pathogenic | 0.9983 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/F | 0.9348 | likely_pathogenic | 0.9166 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.653368009 | None | None | N |
L/G | 0.9921 | likely_pathogenic | 0.9931 | pathogenic | -2.829 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9949 | likely_pathogenic | 0.9954 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/I | 0.5688 | likely_pathogenic | 0.5458 | ambiguous | -1.156 | Destabilizing | 0.991 | D | 0.828 | deleterious | D | 0.617302125 | None | None | N |
L/K | 0.9947 | likely_pathogenic | 0.9952 | pathogenic | -1.607 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.6044 | likely_pathogenic | 0.5468 | ambiguous | -1.113 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/N | 0.994 | likely_pathogenic | 0.9952 | pathogenic | -1.661 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/P | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/Q | 0.9913 | likely_pathogenic | 0.9926 | pathogenic | -1.706 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/R | 0.9895 | likely_pathogenic | 0.9904 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/S | 0.9969 | likely_pathogenic | 0.9971 | pathogenic | -2.512 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.670194587 | None | None | N |
L/T | 0.9839 | likely_pathogenic | 0.9856 | pathogenic | -2.247 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/V | 0.6008 | likely_pathogenic | 0.5851 | pathogenic | -1.539 | Destabilizing | 0.993 | D | 0.837 | deleterious | D | 0.594428548 | None | None | N |
L/W | 0.9944 | likely_pathogenic | 0.9926 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/Y | 0.9943 | likely_pathogenic | 0.9937 | pathogenic | -1.548 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.