Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24683 | 74272;74273;74274 | chr2:178572085;178572084;178572083 | chr2:179436812;179436811;179436810 |
N2AB | 23042 | 69349;69350;69351 | chr2:178572085;178572084;178572083 | chr2:179436812;179436811;179436810 |
N2A | 22115 | 66568;66569;66570 | chr2:178572085;178572084;178572083 | chr2:179436812;179436811;179436810 |
N2B | 15618 | 47077;47078;47079 | chr2:178572085;178572084;178572083 | chr2:179436812;179436811;179436810 |
Novex-1 | 15743 | 47452;47453;47454 | chr2:178572085;178572084;178572083 | chr2:179436812;179436811;179436810 |
Novex-2 | 15810 | 47653;47654;47655 | chr2:178572085;178572084;178572083 | chr2:179436812;179436811;179436810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1708407970 | None | 0.524 | N | 0.475 | 0.232 | 0.26547132957 | gnomAD-4.0.0 | 3.18489E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56917E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs755064877 | -0.94 | 0.892 | N | 0.542 | 0.294 | 0.266385636622 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.82E-05 | None | 0 | 0 | 0 |
E/K | rs755064877 | -0.94 | 0.892 | N | 0.542 | 0.294 | 0.266385636622 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
E/K | rs755064877 | -0.94 | 0.892 | N | 0.542 | 0.294 | 0.266385636622 | gnomAD-4.0.0 | 6.40999E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.70241E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3221 | likely_benign | 0.2746 | benign | -0.753 | Destabilizing | 0.524 | D | 0.475 | neutral | N | 0.48569438 | None | None | N |
E/C | 0.9391 | likely_pathogenic | 0.9239 | pathogenic | -0.443 | Destabilizing | 0.996 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/D | 0.325 | likely_benign | 0.3178 | benign | -0.987 | Destabilizing | 0.637 | D | 0.446 | neutral | N | 0.510688825 | None | None | N |
E/F | 0.9364 | likely_pathogenic | 0.9155 | pathogenic | 0.041 | Stabilizing | 0.95 | D | 0.743 | deleterious | None | None | None | None | N |
E/G | 0.3184 | likely_benign | 0.2944 | benign | -1.144 | Destabilizing | 0.981 | D | 0.651 | neutral | N | 0.496759522 | None | None | N |
E/H | 0.7605 | likely_pathogenic | 0.7151 | pathogenic | -0.148 | Destabilizing | 0.997 | D | 0.621 | neutral | None | None | None | None | N |
E/I | 0.7069 | likely_pathogenic | 0.6459 | pathogenic | 0.321 | Stabilizing | 0.816 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/K | 0.3086 | likely_benign | 0.2609 | benign | -0.539 | Destabilizing | 0.892 | D | 0.542 | neutral | N | 0.451293805 | None | None | N |
E/L | 0.7395 | likely_pathogenic | 0.6809 | pathogenic | 0.321 | Stabilizing | 0.559 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/M | 0.6593 | likely_pathogenic | 0.5908 | pathogenic | 0.681 | Stabilizing | 0.924 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/N | 0.4385 | ambiguous | 0.4058 | ambiguous | -1.13 | Destabilizing | 0.962 | D | 0.652 | neutral | None | None | None | None | N |
E/P | 0.9892 | likely_pathogenic | 0.9866 | pathogenic | -0.015 | Destabilizing | 0.891 | D | 0.662 | neutral | None | None | None | None | N |
E/Q | 0.2026 | likely_benign | 0.1707 | benign | -0.951 | Destabilizing | 0.984 | D | 0.657 | neutral | N | 0.453699391 | None | None | N |
E/R | 0.5288 | ambiguous | 0.4674 | ambiguous | -0.183 | Destabilizing | 0.975 | D | 0.645 | neutral | None | None | None | None | N |
E/S | 0.3616 | ambiguous | 0.3106 | benign | -1.442 | Destabilizing | 0.855 | D | 0.597 | neutral | None | None | None | None | N |
E/T | 0.433 | ambiguous | 0.3661 | ambiguous | -1.11 | Destabilizing | 0.934 | D | 0.647 | neutral | None | None | None | None | N |
E/V | 0.4755 | ambiguous | 0.418 | ambiguous | -0.015 | Destabilizing | 0.01 | N | 0.358 | neutral | N | 0.467532693 | None | None | N |
E/W | 0.9852 | likely_pathogenic | 0.9802 | pathogenic | 0.344 | Stabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/Y | 0.8832 | likely_pathogenic | 0.8619 | pathogenic | 0.31 | Stabilizing | 0.99 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.