Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24695 | 74308;74309;74310 | chr2:178572049;178572048;178572047 | chr2:179436776;179436775;179436774 |
N2AB | 23054 | 69385;69386;69387 | chr2:178572049;178572048;178572047 | chr2:179436776;179436775;179436774 |
N2A | 22127 | 66604;66605;66606 | chr2:178572049;178572048;178572047 | chr2:179436776;179436775;179436774 |
N2B | 15630 | 47113;47114;47115 | chr2:178572049;178572048;178572047 | chr2:179436776;179436775;179436774 |
Novex-1 | 15755 | 47488;47489;47490 | chr2:178572049;178572048;178572047 | chr2:179436776;179436775;179436774 |
Novex-2 | 15822 | 47689;47690;47691 | chr2:178572049;178572048;178572047 | chr2:179436776;179436775;179436774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.934 | N | 0.687 | 0.27 | 0.254244900254 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6242 | likely_pathogenic | 0.6126 | pathogenic | 0.076 | Stabilizing | 0.781 | D | 0.591 | neutral | None | None | None | None | N |
K/C | 0.7648 | likely_pathogenic | 0.778 | pathogenic | -0.184 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | N |
K/D | 0.9547 | likely_pathogenic | 0.954 | pathogenic | -0.05 | Destabilizing | 0.962 | D | 0.65 | neutral | None | None | None | None | N |
K/E | 0.6716 | likely_pathogenic | 0.68 | pathogenic | -0.054 | Destabilizing | 0.766 | D | 0.607 | neutral | N | 0.495988731 | None | None | N |
K/F | 0.8972 | likely_pathogenic | 0.8894 | pathogenic | -0.17 | Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
K/G | 0.8359 | likely_pathogenic | 0.8409 | pathogenic | -0.099 | Destabilizing | 0.022 | N | 0.458 | neutral | None | None | None | None | N |
K/H | 0.5051 | ambiguous | 0.5223 | ambiguous | -0.283 | Destabilizing | 0.996 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/I | 0.6654 | likely_pathogenic | 0.6405 | pathogenic | 0.453 | Stabilizing | 0.82 | D | 0.754 | deleterious | None | None | None | None | N |
K/L | 0.7054 | likely_pathogenic | 0.6838 | pathogenic | 0.453 | Stabilizing | 0.599 | D | 0.65 | neutral | None | None | None | None | N |
K/M | 0.4035 | ambiguous | 0.3836 | ambiguous | 0.178 | Stabilizing | 0.981 | D | 0.693 | prob.neutral | N | 0.468459177 | None | None | N |
K/N | 0.7684 | likely_pathogenic | 0.7892 | pathogenic | 0.301 | Stabilizing | 0.95 | D | 0.667 | neutral | N | 0.4977596 | None | None | N |
K/P | 0.9924 | likely_pathogenic | 0.9926 | pathogenic | 0.354 | Stabilizing | 0.994 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/Q | 0.3394 | likely_benign | 0.3432 | ambiguous | 0.116 | Stabilizing | 0.934 | D | 0.687 | prob.neutral | N | 0.507725877 | None | None | N |
K/R | 0.1195 | likely_benign | 0.1176 | benign | 0.069 | Stabilizing | 0.669 | D | 0.575 | neutral | N | 0.467191729 | None | None | N |
K/S | 0.8073 | likely_pathogenic | 0.8098 | pathogenic | -0.141 | Destabilizing | 0.877 | D | 0.63 | neutral | None | None | None | None | N |
K/T | 0.5768 | likely_pathogenic | 0.5411 | ambiguous | -0.01 | Destabilizing | 0.92 | D | 0.649 | neutral | N | 0.516961436 | None | None | N |
K/V | 0.574 | likely_pathogenic | 0.5505 | ambiguous | 0.354 | Stabilizing | 0.663 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/W | 0.9297 | likely_pathogenic | 0.9233 | pathogenic | -0.213 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
K/Y | 0.778 | likely_pathogenic | 0.7724 | pathogenic | 0.142 | Stabilizing | 0.878 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.