Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24702 | 74329;74330;74331 | chr2:178572028;178572027;178572026 | chr2:179436755;179436754;179436753 |
N2AB | 23061 | 69406;69407;69408 | chr2:178572028;178572027;178572026 | chr2:179436755;179436754;179436753 |
N2A | 22134 | 66625;66626;66627 | chr2:178572028;178572027;178572026 | chr2:179436755;179436754;179436753 |
N2B | 15637 | 47134;47135;47136 | chr2:178572028;178572027;178572026 | chr2:179436755;179436754;179436753 |
Novex-1 | 15762 | 47509;47510;47511 | chr2:178572028;178572027;178572026 | chr2:179436755;179436754;179436753 |
Novex-2 | 15829 | 47710;47711;47712 | chr2:178572028;178572027;178572026 | chr2:179436755;179436754;179436753 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.393 | N | 0.247 | 0.157 | 0.173771789658 | gnomAD-4.0.0 | 6.8445E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99622E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1576 | likely_benign | 0.1665 | benign | -0.754 | Destabilizing | 0.014 | N | 0.213 | neutral | None | None | None | None | N |
Q/C | 0.6353 | likely_pathogenic | 0.6404 | pathogenic | -0.088 | Destabilizing | 0.984 | D | 0.41 | neutral | None | None | None | None | N |
Q/D | 0.4538 | ambiguous | 0.48 | ambiguous | -0.107 | Destabilizing | 0.611 | D | 0.272 | neutral | None | None | None | None | N |
Q/E | 0.0884 | likely_benign | 0.0958 | benign | 0.015 | Stabilizing | 0.403 | N | 0.217 | neutral | N | 0.372307372 | None | None | N |
Q/F | 0.5961 | likely_pathogenic | 0.5899 | pathogenic | -0.413 | Destabilizing | 0.834 | D | 0.467 | neutral | None | None | None | None | N |
Q/G | 0.3021 | likely_benign | 0.3121 | benign | -1.112 | Destabilizing | 0.003 | N | 0.251 | neutral | None | None | None | None | N |
Q/H | 0.2503 | likely_benign | 0.2485 | benign | -0.682 | Destabilizing | 0.944 | D | 0.473 | neutral | N | 0.491676203 | None | None | N |
Q/I | 0.2294 | likely_benign | 0.2257 | benign | 0.165 | Stabilizing | 0.339 | N | 0.561 | neutral | None | None | None | None | N |
Q/K | 0.1239 | likely_benign | 0.1331 | benign | -0.119 | Destabilizing | 0.393 | N | 0.247 | neutral | N | 0.451040301 | None | None | N |
Q/L | 0.0927 | likely_benign | 0.0941 | benign | 0.165 | Stabilizing | 0.138 | N | 0.31 | neutral | N | 0.463220165 | None | None | N |
Q/M | 0.2424 | likely_benign | 0.2427 | benign | 0.414 | Stabilizing | 0.879 | D | 0.409 | neutral | None | None | None | None | N |
Q/N | 0.291 | likely_benign | 0.2989 | benign | -0.736 | Destabilizing | 0.611 | D | 0.311 | neutral | None | None | None | None | N |
Q/P | 0.0805 | likely_benign | 0.0788 | benign | -0.111 | Destabilizing | 0.001 | N | 0.217 | neutral | N | 0.381660361 | None | None | N |
Q/R | 0.1702 | likely_benign | 0.1736 | benign | -0.058 | Destabilizing | 0.507 | D | 0.318 | neutral | N | 0.459371783 | None | None | N |
Q/S | 0.2125 | likely_benign | 0.2193 | benign | -0.932 | Destabilizing | 0.347 | N | 0.177 | neutral | None | None | None | None | N |
Q/T | 0.1662 | likely_benign | 0.1724 | benign | -0.601 | Destabilizing | 0.04 | N | 0.353 | neutral | None | None | None | None | N |
Q/V | 0.151 | likely_benign | 0.1515 | benign | -0.111 | Destabilizing | None | N | 0.295 | neutral | None | None | None | None | N |
Q/W | 0.6121 | likely_pathogenic | 0.6004 | pathogenic | -0.235 | Destabilizing | 0.997 | D | 0.483 | neutral | None | None | None | None | N |
Q/Y | 0.4525 | ambiguous | 0.4483 | ambiguous | -0.011 | Destabilizing | 0.911 | D | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.