Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2471 | 7636;7637;7638 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
N2AB | 2471 | 7636;7637;7638 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
N2A | 2471 | 7636;7637;7638 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
N2B | 2425 | 7498;7499;7500 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
Novex-1 | 2425 | 7498;7499;7500 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
Novex-2 | 2425 | 7498;7499;7500 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
Novex-3 | 2471 | 7636;7637;7638 | chr2:178773645;178773644;178773643 | chr2:179638372;179638371;179638370 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1208886109 | -0.442 | 0.31 | N | 0.267 | 0.188 | 0.241664281697 | gnomAD-4.0.0 | 1.59073E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0962 | likely_benign | 0.0905 | benign | -0.493 | Destabilizing | 0.134 | N | 0.269 | neutral | N | 0.49905219 | None | None | N |
P/C | 0.7048 | likely_pathogenic | 0.7147 | pathogenic | -0.723 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
P/D | 0.5783 | likely_pathogenic | 0.6028 | pathogenic | -0.297 | Destabilizing | 0.939 | D | 0.414 | neutral | None | None | None | None | N |
P/E | 0.3846 | ambiguous | 0.4011 | ambiguous | -0.41 | Destabilizing | 0.884 | D | 0.429 | neutral | None | None | None | None | N |
P/F | 0.7483 | likely_pathogenic | 0.7625 | pathogenic | -0.71 | Destabilizing | 0.997 | D | 0.565 | neutral | None | None | None | None | N |
P/G | 0.3826 | ambiguous | 0.384 | ambiguous | -0.621 | Destabilizing | 0.939 | D | 0.547 | neutral | None | None | None | None | N |
P/H | 0.3389 | likely_benign | 0.3424 | ambiguous | -0.176 | Destabilizing | 0.988 | D | 0.549 | neutral | N | 0.5071569 | None | None | N |
P/I | 0.54 | ambiguous | 0.5494 | ambiguous | -0.307 | Destabilizing | 0.991 | D | 0.571 | neutral | None | None | None | None | N |
P/K | 0.4705 | ambiguous | 0.5028 | ambiguous | -0.464 | Destabilizing | 0.884 | D | 0.451 | neutral | None | None | None | None | N |
P/L | 0.2081 | likely_benign | 0.2106 | benign | -0.307 | Destabilizing | 0.92 | D | 0.545 | neutral | N | 0.502277555 | None | None | N |
P/M | 0.46 | ambiguous | 0.4576 | ambiguous | -0.383 | Destabilizing | 0.997 | D | 0.547 | neutral | None | None | None | None | N |
P/N | 0.4044 | ambiguous | 0.4098 | ambiguous | -0.251 | Destabilizing | 0.939 | D | 0.517 | neutral | None | None | None | None | N |
P/Q | 0.2114 | likely_benign | 0.213 | benign | -0.493 | Destabilizing | 0.373 | N | 0.275 | neutral | None | None | None | None | N |
P/R | 0.3509 | ambiguous | 0.3694 | ambiguous | 0.059 | Stabilizing | 0.976 | D | 0.521 | neutral | N | 0.506578377 | None | None | N |
P/S | 0.1465 | likely_benign | 0.1432 | benign | -0.615 | Destabilizing | 0.31 | N | 0.267 | neutral | N | 0.48830008 | None | None | N |
P/T | 0.1475 | likely_benign | 0.1418 | benign | -0.626 | Destabilizing | 0.852 | D | 0.447 | neutral | N | 0.485566884 | None | None | N |
P/V | 0.3608 | ambiguous | 0.3582 | ambiguous | -0.335 | Destabilizing | 0.939 | D | 0.547 | neutral | None | None | None | None | N |
P/W | 0.8592 | likely_pathogenic | 0.8691 | pathogenic | -0.779 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
P/Y | 0.7102 | likely_pathogenic | 0.7299 | pathogenic | -0.483 | Destabilizing | 0.997 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.