Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24710 | 74353;74354;74355 | chr2:178572004;178572003;178572002 | chr2:179436731;179436730;179436729 |
N2AB | 23069 | 69430;69431;69432 | chr2:178572004;178572003;178572002 | chr2:179436731;179436730;179436729 |
N2A | 22142 | 66649;66650;66651 | chr2:178572004;178572003;178572002 | chr2:179436731;179436730;179436729 |
N2B | 15645 | 47158;47159;47160 | chr2:178572004;178572003;178572002 | chr2:179436731;179436730;179436729 |
Novex-1 | 15770 | 47533;47534;47535 | chr2:178572004;178572003;178572002 | chr2:179436731;179436730;179436729 |
Novex-2 | 15837 | 47734;47735;47736 | chr2:178572004;178572003;178572002 | chr2:179436731;179436730;179436729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.997 | N | 0.646 | 0.515 | 0.457377140028 | gnomAD-4.0.0 | 1.59243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7572 | likely_pathogenic | 0.7339 | pathogenic | -0.442 | Destabilizing | 0.998 | D | 0.701 | prob.delet. | None | None | None | None | N |
K/C | 0.8991 | likely_pathogenic | 0.8952 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.724 | deleterious | None | None | None | None | N |
K/D | 0.9194 | likely_pathogenic | 0.9144 | pathogenic | -0.031 | Destabilizing | 0.999 | D | 0.694 | prob.delet. | None | None | None | None | N |
K/E | 0.4409 | ambiguous | 0.4365 | ambiguous | 0.034 | Stabilizing | 0.99 | D | 0.711 | prob.delet. | N | 0.517550508 | None | None | N |
K/F | 0.9781 | likely_pathogenic | 0.9738 | pathogenic | -0.365 | Destabilizing | 1.0 | D | 0.697 | prob.delet. | None | None | None | None | N |
K/G | 0.8352 | likely_pathogenic | 0.8299 | pathogenic | -0.755 | Destabilizing | 0.999 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/H | 0.6089 | likely_pathogenic | 0.5924 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
K/I | 0.8311 | likely_pathogenic | 0.8089 | pathogenic | 0.339 | Stabilizing | 0.972 | D | 0.72 | deleterious | N | 0.479340821 | None | None | N |
K/L | 0.8083 | likely_pathogenic | 0.7948 | pathogenic | 0.339 | Stabilizing | 0.978 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/M | 0.6308 | likely_pathogenic | 0.6105 | pathogenic | 0.298 | Stabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
K/N | 0.8331 | likely_pathogenic | 0.8125 | pathogenic | -0.253 | Destabilizing | 0.999 | D | 0.701 | prob.delet. | N | 0.502053432 | None | None | N |
K/P | 0.9898 | likely_pathogenic | 0.9901 | pathogenic | 0.109 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
K/Q | 0.2566 | likely_benign | 0.2467 | benign | -0.424 | Destabilizing | 0.993 | D | 0.733 | deleterious | N | 0.467451083 | None | None | N |
K/R | 0.093 | likely_benign | 0.0908 | benign | -0.462 | Destabilizing | 0.984 | D | 0.65 | prob.neutral | N | 0.469954136 | None | None | N |
K/S | 0.7819 | likely_pathogenic | 0.7712 | pathogenic | -0.908 | Destabilizing | 0.998 | D | 0.735 | deleterious | None | None | None | None | N |
K/T | 0.4952 | ambiguous | 0.4635 | ambiguous | -0.652 | Destabilizing | 0.997 | D | 0.646 | neutral | N | 0.477365811 | None | None | N |
K/V | 0.7097 | likely_pathogenic | 0.689 | pathogenic | 0.109 | Stabilizing | 0.984 | D | 0.707 | prob.delet. | None | None | None | None | N |
K/W | 0.9561 | likely_pathogenic | 0.9504 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
K/Y | 0.9305 | likely_pathogenic | 0.9214 | pathogenic | 0.078 | Stabilizing | 0.996 | D | 0.723 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.