Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24723 | 74392;74393;74394 | chr2:178571965;178571964;178571963 | chr2:179436692;179436691;179436690 |
N2AB | 23082 | 69469;69470;69471 | chr2:178571965;178571964;178571963 | chr2:179436692;179436691;179436690 |
N2A | 22155 | 66688;66689;66690 | chr2:178571965;178571964;178571963 | chr2:179436692;179436691;179436690 |
N2B | 15658 | 47197;47198;47199 | chr2:178571965;178571964;178571963 | chr2:179436692;179436691;179436690 |
Novex-1 | 15783 | 47572;47573;47574 | chr2:178571965;178571964;178571963 | chr2:179436692;179436691;179436690 |
Novex-2 | 15850 | 47773;47774;47775 | chr2:178571965;178571964;178571963 | chr2:179436692;179436691;179436690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1708346317 | None | None | N | 0.074 | 0.117 | 0.112648838833 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2585 | likely_benign | 0.2491 | benign | -0.717 | Destabilizing | 0.007 | N | 0.311 | neutral | None | None | None | None | N |
N/C | 0.3365 | likely_benign | 0.3393 | benign | 0.068 | Stabilizing | 0.356 | N | 0.442 | neutral | None | None | None | None | N |
N/D | 0.141 | likely_benign | 0.1489 | benign | 0.188 | Stabilizing | 0.024 | N | 0.281 | neutral | N | 0.464082248 | None | None | N |
N/E | 0.4035 | ambiguous | 0.4274 | ambiguous | 0.254 | Stabilizing | 0.031 | N | 0.256 | neutral | None | None | None | None | N |
N/F | 0.7147 | likely_pathogenic | 0.7186 | pathogenic | -0.73 | Destabilizing | 0.356 | N | 0.485 | neutral | None | None | None | None | N |
N/G | 0.2275 | likely_benign | 0.2175 | benign | -1.002 | Destabilizing | 0.016 | N | 0.287 | neutral | None | None | None | None | N |
N/H | 0.1053 | likely_benign | 0.1042 | benign | -0.742 | Destabilizing | 0.56 | D | 0.401 | neutral | D | 0.527536294 | None | None | N |
N/I | 0.5087 | ambiguous | 0.5225 | ambiguous | -0.017 | Destabilizing | 0.029 | N | 0.463 | neutral | N | 0.496986636 | None | None | N |
N/K | 0.2807 | likely_benign | 0.2833 | benign | 0.073 | Stabilizing | 0.024 | N | 0.259 | neutral | N | 0.496786526 | None | None | N |
N/L | 0.3778 | ambiguous | 0.3776 | ambiguous | -0.017 | Destabilizing | 0.016 | N | 0.393 | neutral | None | None | None | None | N |
N/M | 0.4624 | ambiguous | 0.4731 | ambiguous | 0.211 | Stabilizing | 0.356 | N | 0.445 | neutral | None | None | None | None | N |
N/P | 0.354 | ambiguous | 0.364 | ambiguous | -0.221 | Destabilizing | 0.136 | N | 0.457 | neutral | None | None | None | None | N |
N/Q | 0.3296 | likely_benign | 0.3295 | benign | -0.441 | Destabilizing | 0.072 | N | 0.319 | neutral | None | None | None | None | N |
N/R | 0.3129 | likely_benign | 0.3134 | benign | 0.031 | Stabilizing | 0.072 | N | 0.238 | neutral | None | None | None | None | N |
N/S | 0.0738 | likely_benign | 0.0707 | benign | -0.526 | Destabilizing | None | N | 0.074 | neutral | N | 0.440242597 | None | None | N |
N/T | 0.1162 | likely_benign | 0.1099 | benign | -0.261 | Destabilizing | None | N | 0.093 | neutral | N | 0.496135952 | None | None | N |
N/V | 0.456 | ambiguous | 0.4609 | ambiguous | -0.221 | Destabilizing | 0.016 | N | 0.427 | neutral | None | None | None | None | N |
N/W | 0.8328 | likely_pathogenic | 0.8227 | pathogenic | -0.546 | Destabilizing | 0.864 | D | 0.467 | neutral | None | None | None | None | N |
N/Y | 0.2652 | likely_benign | 0.2561 | benign | -0.308 | Destabilizing | 0.295 | N | 0.463 | neutral | N | 0.503988076 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.