Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24731 | 74416;74417;74418 | chr2:178571941;178571940;178571939 | chr2:179436668;179436667;179436666 |
N2AB | 23090 | 69493;69494;69495 | chr2:178571941;178571940;178571939 | chr2:179436668;179436667;179436666 |
N2A | 22163 | 66712;66713;66714 | chr2:178571941;178571940;178571939 | chr2:179436668;179436667;179436666 |
N2B | 15666 | 47221;47222;47223 | chr2:178571941;178571940;178571939 | chr2:179436668;179436667;179436666 |
Novex-1 | 15791 | 47596;47597;47598 | chr2:178571941;178571940;178571939 | chr2:179436668;179436667;179436666 |
Novex-2 | 15858 | 47797;47798;47799 | chr2:178571941;178571940;178571939 | chr2:179436668;179436667;179436666 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs76565211 | -0.218 | 0.822 | N | 0.49 | 0.282 | None | gnomAD-4.0.0 | 3.18789E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.79435E-05 | 0 | 0 | 0 | 0 |
E/K | rs186780326 | 0.903 | 0.822 | N | 0.436 | 0.311 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
E/K | rs186780326 | 0.903 | 0.822 | N | 0.436 | 0.311 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93349E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs186780326 | 0.903 | 0.822 | N | 0.436 | 0.311 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/K | rs186780326 | 0.903 | 0.822 | N | 0.436 | 0.311 | None | gnomAD-4.0.0 | 4.33916E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 8.94694E-05 | None | 0 | 0 | 0 | 0 | 4.80446E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2728 | likely_benign | 0.2818 | benign | -0.435 | Destabilizing | 0.822 | D | 0.476 | neutral | N | 0.470775084 | None | None | I |
E/C | 0.8867 | likely_pathogenic | 0.8898 | pathogenic | 0.058 | Stabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/D | 0.1146 | likely_benign | 0.1138 | benign | -0.367 | Destabilizing | 0.002 | N | 0.172 | neutral | N | 0.447647706 | None | None | I |
E/F | 0.8876 | likely_pathogenic | 0.8972 | pathogenic | -0.363 | Destabilizing | 0.993 | D | 0.593 | neutral | None | None | None | None | I |
E/G | 0.2373 | likely_benign | 0.2452 | benign | -0.649 | Destabilizing | 0.822 | D | 0.49 | neutral | N | 0.454770742 | None | None | I |
E/H | 0.547 | ambiguous | 0.5815 | pathogenic | -0.296 | Destabilizing | 0.993 | D | 0.357 | neutral | None | None | None | None | I |
E/I | 0.6652 | likely_pathogenic | 0.6933 | pathogenic | 0.097 | Stabilizing | 0.978 | D | 0.581 | neutral | None | None | None | None | I |
E/K | 0.1788 | likely_benign | 0.1966 | benign | 0.261 | Stabilizing | 0.822 | D | 0.436 | neutral | N | 0.498500601 | None | None | I |
E/L | 0.6763 | likely_pathogenic | 0.6946 | pathogenic | 0.097 | Stabilizing | 0.978 | D | 0.565 | neutral | None | None | None | None | I |
E/M | 0.6187 | likely_pathogenic | 0.641 | pathogenic | 0.332 | Stabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | I |
E/N | 0.2537 | likely_benign | 0.259 | benign | 0.006 | Stabilizing | 0.754 | D | 0.41 | neutral | None | None | None | None | I |
E/P | 0.9615 | likely_pathogenic | 0.9695 | pathogenic | -0.06 | Destabilizing | 0.978 | D | 0.407 | neutral | None | None | None | None | I |
E/Q | 0.1661 | likely_benign | 0.1741 | benign | 0.04 | Stabilizing | 0.904 | D | 0.398 | neutral | N | 0.4804722 | None | None | I |
E/R | 0.3383 | likely_benign | 0.3724 | ambiguous | 0.406 | Stabilizing | 0.978 | D | 0.373 | neutral | None | None | None | None | I |
E/S | 0.2317 | likely_benign | 0.2446 | benign | -0.185 | Destabilizing | 0.86 | D | 0.417 | neutral | None | None | None | None | I |
E/T | 0.316 | likely_benign | 0.3407 | ambiguous | -0.012 | Destabilizing | 0.86 | D | 0.426 | neutral | None | None | None | None | I |
E/V | 0.4292 | ambiguous | 0.4559 | ambiguous | -0.06 | Destabilizing | 0.97 | D | 0.473 | neutral | N | 0.483398837 | None | None | I |
E/W | 0.958 | likely_pathogenic | 0.9635 | pathogenic | -0.223 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/Y | 0.7501 | likely_pathogenic | 0.7668 | pathogenic | -0.122 | Destabilizing | 0.993 | D | 0.536 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.