Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24735 | 74428;74429;74430 | chr2:178571929;178571928;178571927 | chr2:179436656;179436655;179436654 |
N2AB | 23094 | 69505;69506;69507 | chr2:178571929;178571928;178571927 | chr2:179436656;179436655;179436654 |
N2A | 22167 | 66724;66725;66726 | chr2:178571929;178571928;178571927 | chr2:179436656;179436655;179436654 |
N2B | 15670 | 47233;47234;47235 | chr2:178571929;178571928;178571927 | chr2:179436656;179436655;179436654 |
Novex-1 | 15795 | 47608;47609;47610 | chr2:178571929;178571928;178571927 | chr2:179436656;179436655;179436654 |
Novex-2 | 15862 | 47809;47810;47811 | chr2:178571929;178571928;178571927 | chr2:179436656;179436655;179436654 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs993249767 | None | 0.104 | N | 0.629 | 0.331 | 0.459192005304 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93498E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs993249767 | None | 0.104 | N | 0.629 | 0.331 | 0.459192005304 | gnomAD-4.0.0 | 1.23985E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.47167E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5065 | ambiguous | 0.5166 | ambiguous | -1.51 | Destabilizing | 0.104 | N | 0.629 | neutral | N | 0.517916733 | None | None | N |
V/C | 0.8772 | likely_pathogenic | 0.8901 | pathogenic | -1.09 | Destabilizing | 0.968 | D | 0.779 | deleterious | None | None | None | None | N |
V/D | 0.9866 | likely_pathogenic | 0.9917 | pathogenic | -1.509 | Destabilizing | 0.667 | D | 0.878 | deleterious | N | 0.501114466 | None | None | N |
V/E | 0.9712 | likely_pathogenic | 0.977 | pathogenic | -1.28 | Destabilizing | 0.726 | D | 0.83 | deleterious | None | None | None | None | N |
V/F | 0.4318 | ambiguous | 0.4786 | ambiguous | -0.867 | Destabilizing | 0.497 | N | 0.766 | deleterious | N | 0.441906317 | None | None | N |
V/G | 0.8 | likely_pathogenic | 0.8229 | pathogenic | -2.01 | Highly Destabilizing | 0.667 | D | 0.854 | deleterious | N | 0.501114466 | None | None | N |
V/H | 0.9869 | likely_pathogenic | 0.9902 | pathogenic | -1.577 | Destabilizing | 0.968 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.0667 | likely_benign | 0.0741 | benign | -0.125 | Destabilizing | None | N | 0.195 | neutral | N | 0.388411054 | None | None | N |
V/K | 0.9768 | likely_pathogenic | 0.9811 | pathogenic | -1.131 | Destabilizing | 0.726 | D | 0.833 | deleterious | None | None | None | None | N |
V/L | 0.244 | likely_benign | 0.2912 | benign | -0.125 | Destabilizing | None | N | 0.304 | neutral | N | 0.363386818 | None | None | N |
V/M | 0.2823 | likely_benign | 0.3217 | benign | -0.273 | Destabilizing | 0.567 | D | 0.655 | neutral | None | None | None | None | N |
V/N | 0.9652 | likely_pathogenic | 0.9776 | pathogenic | -1.541 | Destabilizing | 0.89 | D | 0.873 | deleterious | None | None | None | None | N |
V/P | 0.9678 | likely_pathogenic | 0.9755 | pathogenic | -0.56 | Destabilizing | 0.89 | D | 0.853 | deleterious | None | None | None | None | N |
V/Q | 0.9686 | likely_pathogenic | 0.9728 | pathogenic | -1.29 | Destabilizing | 0.89 | D | 0.863 | deleterious | None | None | None | None | N |
V/R | 0.9611 | likely_pathogenic | 0.968 | pathogenic | -1.178 | Destabilizing | 0.726 | D | 0.874 | deleterious | None | None | None | None | N |
V/S | 0.883 | likely_pathogenic | 0.9082 | pathogenic | -2.185 | Highly Destabilizing | 0.726 | D | 0.813 | deleterious | None | None | None | None | N |
V/T | 0.7054 | likely_pathogenic | 0.7289 | pathogenic | -1.788 | Destabilizing | 0.272 | N | 0.649 | neutral | None | None | None | None | N |
V/W | 0.9639 | likely_pathogenic | 0.9713 | pathogenic | -1.226 | Destabilizing | 0.968 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.9037 | likely_pathogenic | 0.9216 | pathogenic | -0.818 | Destabilizing | 0.726 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.