Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24739 | 74440;74441;74442 | chr2:178571917;178571916;178571915 | chr2:179436644;179436643;179436642 |
N2AB | 23098 | 69517;69518;69519 | chr2:178571917;178571916;178571915 | chr2:179436644;179436643;179436642 |
N2A | 22171 | 66736;66737;66738 | chr2:178571917;178571916;178571915 | chr2:179436644;179436643;179436642 |
N2B | 15674 | 47245;47246;47247 | chr2:178571917;178571916;178571915 | chr2:179436644;179436643;179436642 |
Novex-1 | 15799 | 47620;47621;47622 | chr2:178571917;178571916;178571915 | chr2:179436644;179436643;179436642 |
Novex-2 | 15866 | 47821;47822;47823 | chr2:178571917;178571916;178571915 | chr2:179436644;179436643;179436642 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.309 | N | 0.583 | 0.332 | 0.298056030225 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 2.28749E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8596 | likely_pathogenic | 0.8691 | pathogenic | -3.265 | Highly Destabilizing | 0.59 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/C | 0.3614 | ambiguous | 0.3798 | ambiguous | -1.977 | Destabilizing | 0.994 | D | 0.748 | deleterious | N | 0.504557507 | None | None | N |
F/D | 0.9927 | likely_pathogenic | 0.993 | pathogenic | -3.751 | Highly Destabilizing | 0.984 | D | 0.815 | deleterious | None | None | None | None | N |
F/E | 0.9909 | likely_pathogenic | 0.9917 | pathogenic | -3.544 | Highly Destabilizing | 0.953 | D | 0.798 | deleterious | None | None | None | None | N |
F/G | 0.9589 | likely_pathogenic | 0.9588 | pathogenic | -3.687 | Highly Destabilizing | 0.854 | D | 0.781 | deleterious | None | None | None | None | N |
F/H | 0.8308 | likely_pathogenic | 0.8347 | pathogenic | -2.283 | Highly Destabilizing | 0.91 | D | 0.745 | deleterious | None | None | None | None | N |
F/I | 0.2836 | likely_benign | 0.3445 | ambiguous | -1.859 | Destabilizing | 0.521 | D | 0.652 | neutral | N | 0.440181095 | None | None | N |
F/K | 0.9799 | likely_pathogenic | 0.982 | pathogenic | -2.222 | Highly Destabilizing | 0.953 | D | 0.802 | deleterious | None | None | None | None | N |
F/L | 0.9237 | likely_pathogenic | 0.9394 | pathogenic | -1.859 | Destabilizing | 0.309 | N | 0.583 | neutral | N | 0.488977906 | None | None | N |
F/M | 0.6846 | likely_pathogenic | 0.7202 | pathogenic | -1.601 | Destabilizing | 0.953 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/N | 0.9569 | likely_pathogenic | 0.9594 | pathogenic | -2.721 | Highly Destabilizing | 0.984 | D | 0.813 | deleterious | None | None | None | None | N |
F/P | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -2.343 | Highly Destabilizing | 0.984 | D | 0.813 | deleterious | None | None | None | None | N |
F/Q | 0.9637 | likely_pathogenic | 0.9661 | pathogenic | -2.688 | Highly Destabilizing | 0.984 | D | 0.814 | deleterious | None | None | None | None | N |
F/R | 0.9502 | likely_pathogenic | 0.9538 | pathogenic | -1.715 | Destabilizing | 0.953 | D | 0.815 | deleterious | None | None | None | None | N |
F/S | 0.8477 | likely_pathogenic | 0.8535 | pathogenic | -3.278 | Highly Destabilizing | 0.815 | D | 0.778 | deleterious | D | 0.534635625 | None | None | N |
F/T | 0.8852 | likely_pathogenic | 0.8988 | pathogenic | -2.964 | Highly Destabilizing | 0.742 | D | 0.759 | deleterious | None | None | None | None | N |
F/V | 0.2651 | likely_benign | 0.3085 | benign | -2.343 | Highly Destabilizing | 0.007 | N | 0.425 | neutral | N | 0.396883316 | None | None | N |
F/W | 0.6309 | likely_pathogenic | 0.6206 | pathogenic | -0.683 | Destabilizing | 0.953 | D | 0.651 | neutral | None | None | None | None | N |
F/Y | 0.1634 | likely_benign | 0.1507 | benign | -1.175 | Destabilizing | 0.012 | N | 0.223 | neutral | N | 0.460735299 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.