Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24748 | 74467;74468;74469 | chr2:178571890;178571889;178571888 | chr2:179436617;179436616;179436615 |
N2AB | 23107 | 69544;69545;69546 | chr2:178571890;178571889;178571888 | chr2:179436617;179436616;179436615 |
N2A | 22180 | 66763;66764;66765 | chr2:178571890;178571889;178571888 | chr2:179436617;179436616;179436615 |
N2B | 15683 | 47272;47273;47274 | chr2:178571890;178571889;178571888 | chr2:179436617;179436616;179436615 |
Novex-1 | 15808 | 47647;47648;47649 | chr2:178571890;178571889;178571888 | chr2:179436617;179436616;179436615 |
Novex-2 | 15875 | 47848;47849;47850 | chr2:178571890;178571889;178571888 | chr2:179436617;179436616;179436615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs768606900 | 0.226 | 0.193 | D | 0.569 | 0.153 | 0.227260227426 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/I | rs768606900 | 0.226 | 0.193 | D | 0.569 | 0.153 | 0.227260227426 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs768606900 | 0.226 | 0.193 | D | 0.569 | 0.153 | 0.227260227426 | gnomAD-4.0.0 | 5.57875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.62978E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0801 | likely_benign | 0.0761 | benign | -0.858 | Destabilizing | 0.001 | N | 0.227 | neutral | N | 0.486795647 | None | None | N |
T/C | 0.2948 | likely_benign | 0.2823 | benign | -0.401 | Destabilizing | 0.944 | D | 0.597 | neutral | None | None | None | None | N |
T/D | 0.3402 | ambiguous | 0.312 | benign | -0.487 | Destabilizing | 0.388 | N | 0.607 | neutral | None | None | None | None | N |
T/E | 0.2671 | likely_benign | 0.246 | benign | -0.431 | Destabilizing | 0.241 | N | 0.588 | neutral | None | None | None | None | N |
T/F | 0.1418 | likely_benign | 0.135 | benign | -0.684 | Destabilizing | 0.005 | N | 0.482 | neutral | None | None | None | None | N |
T/G | 0.2345 | likely_benign | 0.2129 | benign | -1.18 | Destabilizing | 0.241 | N | 0.596 | neutral | None | None | None | None | N |
T/H | 0.2019 | likely_benign | 0.1885 | benign | -1.381 | Destabilizing | 0.01 | N | 0.516 | neutral | None | None | None | None | N |
T/I | 0.0811 | likely_benign | 0.0764 | benign | -0.069 | Destabilizing | 0.193 | N | 0.569 | neutral | D | 0.522170547 | None | None | N |
T/K | 0.2146 | likely_benign | 0.1993 | benign | -0.869 | Destabilizing | 0.388 | N | 0.587 | neutral | None | None | None | None | N |
T/L | 0.0719 | likely_benign | 0.066 | benign | -0.069 | Destabilizing | 0.116 | N | 0.571 | neutral | None | None | None | None | N |
T/M | 0.0795 | likely_benign | 0.0762 | benign | 0.133 | Stabilizing | 0.818 | D | 0.61 | neutral | None | None | None | None | N |
T/N | 0.111 | likely_benign | 0.108 | benign | -0.929 | Destabilizing | 0.193 | N | 0.567 | neutral | N | 0.500811751 | None | None | N |
T/P | 0.5915 | likely_pathogenic | 0.5766 | pathogenic | -0.299 | Destabilizing | 0.773 | D | 0.62 | neutral | D | 0.528070266 | None | None | N |
T/Q | 0.2063 | likely_benign | 0.1915 | benign | -0.934 | Destabilizing | 0.69 | D | 0.622 | neutral | None | None | None | None | N |
T/R | 0.1894 | likely_benign | 0.1754 | benign | -0.725 | Destabilizing | 0.69 | D | 0.621 | neutral | None | None | None | None | N |
T/S | 0.0874 | likely_benign | 0.0842 | benign | -1.166 | Destabilizing | 0.006 | N | 0.365 | neutral | N | 0.436778217 | None | None | N |
T/V | 0.0787 | likely_benign | 0.0765 | benign | -0.299 | Destabilizing | 0.002 | N | 0.229 | neutral | None | None | None | None | N |
T/W | 0.5113 | ambiguous | 0.4848 | ambiguous | -0.723 | Destabilizing | 0.981 | D | 0.625 | neutral | None | None | None | None | N |
T/Y | 0.2154 | likely_benign | 0.2144 | benign | -0.485 | Destabilizing | 0.527 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.