Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24751 | 74476;74477;74478 | chr2:178571881;178571880;178571879 | chr2:179436608;179436607;179436606 |
N2AB | 23110 | 69553;69554;69555 | chr2:178571881;178571880;178571879 | chr2:179436608;179436607;179436606 |
N2A | 22183 | 66772;66773;66774 | chr2:178571881;178571880;178571879 | chr2:179436608;179436607;179436606 |
N2B | 15686 | 47281;47282;47283 | chr2:178571881;178571880;178571879 | chr2:179436608;179436607;179436606 |
Novex-1 | 15811 | 47656;47657;47658 | chr2:178571881;178571880;178571879 | chr2:179436608;179436607;179436606 |
Novex-2 | 15878 | 47857;47858;47859 | chr2:178571881;178571880;178571879 | chr2:179436608;179436607;179436606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1280335155 | -0.523 | 0.999 | N | 0.583 | 0.386 | 0.223847106136 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs1280335155 | -0.523 | 0.999 | N | 0.583 | 0.386 | 0.223847106136 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85951E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9506 | likely_pathogenic | 0.9523 | pathogenic | -0.944 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/C | 0.9262 | likely_pathogenic | 0.9228 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
K/D | 0.9919 | likely_pathogenic | 0.9925 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/E | 0.886 | likely_pathogenic | 0.8903 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.59 | neutral | D | 0.529779245 | None | None | N |
K/F | 0.9684 | likely_pathogenic | 0.97 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
K/G | 0.9737 | likely_pathogenic | 0.9751 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/H | 0.6943 | likely_pathogenic | 0.6834 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/I | 0.848 | likely_pathogenic | 0.8659 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.869 | deleterious | N | 0.517155492 | None | None | N |
K/L | 0.8372 | likely_pathogenic | 0.8506 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/M | 0.7368 | likely_pathogenic | 0.7521 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/N | 0.9695 | likely_pathogenic | 0.9698 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | D | 0.52294239 | None | None | N |
K/P | 0.997 | likely_pathogenic | 0.9977 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
K/Q | 0.5462 | ambiguous | 0.5541 | ambiguous | -0.907 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.522435411 | None | None | N |
K/R | 0.1029 | likely_benign | 0.1051 | benign | -0.811 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.459280647 | None | None | N |
K/S | 0.9682 | likely_pathogenic | 0.9683 | pathogenic | -1.598 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
K/T | 0.8638 | likely_pathogenic | 0.8833 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.522688901 | None | None | N |
K/V | 0.8398 | likely_pathogenic | 0.8522 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
K/W | 0.9524 | likely_pathogenic | 0.9561 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
K/Y | 0.9168 | likely_pathogenic | 0.916 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.