Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24760 | 74503;74504;74505 | chr2:178571854;178571853;178571852 | chr2:179436581;179436580;179436579 |
N2AB | 23119 | 69580;69581;69582 | chr2:178571854;178571853;178571852 | chr2:179436581;179436580;179436579 |
N2A | 22192 | 66799;66800;66801 | chr2:178571854;178571853;178571852 | chr2:179436581;179436580;179436579 |
N2B | 15695 | 47308;47309;47310 | chr2:178571854;178571853;178571852 | chr2:179436581;179436580;179436579 |
Novex-1 | 15820 | 47683;47684;47685 | chr2:178571854;178571853;178571852 | chr2:179436581;179436580;179436579 |
Novex-2 | 15887 | 47884;47885;47886 | chr2:178571854;178571853;178571852 | chr2:179436581;179436580;179436579 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs762222770 | None | 0.822 | N | 0.363 | 0.17 | 0.0954503805726 | gnomAD-4.0.0 | 4.77514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57795E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1528 | likely_benign | 0.1554 | benign | -0.143 | Destabilizing | 0.656 | D | 0.383 | neutral | N | 0.471156497 | None | None | N |
T/C | 0.8157 | likely_pathogenic | 0.8202 | pathogenic | -0.285 | Destabilizing | 0.998 | D | 0.448 | neutral | None | None | None | None | N |
T/D | 0.7593 | likely_pathogenic | 0.7532 | pathogenic | 0.018 | Stabilizing | 0.978 | D | 0.391 | neutral | None | None | None | None | N |
T/E | 0.6618 | likely_pathogenic | 0.6467 | pathogenic | -0.073 | Destabilizing | 0.956 | D | 0.383 | neutral | None | None | None | None | N |
T/F | 0.6654 | likely_pathogenic | 0.663 | pathogenic | -0.795 | Destabilizing | 0.978 | D | 0.501 | neutral | None | None | None | None | N |
T/G | 0.4312 | ambiguous | 0.4314 | ambiguous | -0.211 | Destabilizing | 0.956 | D | 0.398 | neutral | None | None | None | None | N |
T/H | 0.6278 | likely_pathogenic | 0.6237 | pathogenic | -0.398 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | N |
T/I | 0.5027 | ambiguous | 0.4919 | ambiguous | -0.089 | Destabilizing | 0.125 | N | 0.329 | neutral | N | 0.468022698 | None | None | N |
T/K | 0.5336 | ambiguous | 0.5388 | ambiguous | -0.261 | Destabilizing | 0.956 | D | 0.388 | neutral | None | None | None | None | N |
T/L | 0.192 | likely_benign | 0.1976 | benign | -0.089 | Destabilizing | 0.754 | D | 0.39 | neutral | None | None | None | None | N |
T/M | 0.1526 | likely_benign | 0.1561 | benign | -0.093 | Destabilizing | 0.994 | D | 0.399 | neutral | None | None | None | None | N |
T/N | 0.3258 | likely_benign | 0.3369 | benign | -0.031 | Destabilizing | 0.97 | D | 0.377 | neutral | N | 0.46576932 | None | None | N |
T/P | 0.2775 | likely_benign | 0.2843 | benign | -0.082 | Destabilizing | 0.014 | N | 0.329 | neutral | N | 0.443431178 | None | None | N |
T/Q | 0.4625 | ambiguous | 0.4683 | ambiguous | -0.244 | Destabilizing | 0.978 | D | 0.396 | neutral | None | None | None | None | N |
T/R | 0.5148 | ambiguous | 0.5114 | ambiguous | 0.025 | Stabilizing | 0.978 | D | 0.387 | neutral | None | None | None | None | N |
T/S | 0.1765 | likely_benign | 0.1846 | benign | -0.191 | Destabilizing | 0.822 | D | 0.363 | neutral | N | 0.411222759 | None | None | N |
T/V | 0.3078 | likely_benign | 0.3063 | benign | -0.082 | Destabilizing | 0.754 | D | 0.383 | neutral | None | None | None | None | N |
T/W | 0.9014 | likely_pathogenic | 0.9036 | pathogenic | -0.883 | Destabilizing | 0.998 | D | 0.586 | neutral | None | None | None | None | N |
T/Y | 0.7047 | likely_pathogenic | 0.7093 | pathogenic | -0.558 | Destabilizing | 0.993 | D | 0.496 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.