Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24761 | 74506;74507;74508 | chr2:178571851;178571850;178571849 | chr2:179436578;179436577;179436576 |
N2AB | 23120 | 69583;69584;69585 | chr2:178571851;178571850;178571849 | chr2:179436578;179436577;179436576 |
N2A | 22193 | 66802;66803;66804 | chr2:178571851;178571850;178571849 | chr2:179436578;179436577;179436576 |
N2B | 15696 | 47311;47312;47313 | chr2:178571851;178571850;178571849 | chr2:179436578;179436577;179436576 |
Novex-1 | 15821 | 47686;47687;47688 | chr2:178571851;178571850;178571849 | chr2:179436578;179436577;179436576 |
Novex-2 | 15888 | 47887;47888;47889 | chr2:178571851;178571850;178571849 | chr2:179436578;179436577;179436576 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs1708301817 | None | 1.0 | N | 0.694 | 0.463 | 0.622825188919 | gnomAD-4.0.0 | 2.0529E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.82819E-05 | 0 | None | 0 | 0 | 1.79916E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9615 | likely_pathogenic | 0.9603 | pathogenic | -0.801 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
R/C | 0.767 | likely_pathogenic | 0.792 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
R/D | 0.983 | likely_pathogenic | 0.982 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
R/E | 0.9375 | likely_pathogenic | 0.9386 | pathogenic | -0.018 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
R/F | 0.9814 | likely_pathogenic | 0.9836 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
R/G | 0.9434 | likely_pathogenic | 0.9388 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.495364253 | None | None | N |
R/H | 0.4269 | ambiguous | 0.4696 | ambiguous | -1.411 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
R/I | 0.9423 | likely_pathogenic | 0.9493 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.668 | neutral | D | 0.522876257 | None | None | N |
R/K | 0.5437 | ambiguous | 0.5601 | ambiguous | -0.864 | Destabilizing | 0.997 | D | 0.474 | neutral | N | 0.474965366 | None | None | N |
R/L | 0.9087 | likely_pathogenic | 0.9136 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
R/M | 0.9444 | likely_pathogenic | 0.9471 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
R/N | 0.9605 | likely_pathogenic | 0.956 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/P | 0.9924 | likely_pathogenic | 0.9881 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
R/Q | 0.5347 | ambiguous | 0.5454 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
R/S | 0.9678 | likely_pathogenic | 0.9672 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.491338555 | None | None | N |
R/T | 0.9257 | likely_pathogenic | 0.9323 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.490021882 | None | None | N |
R/V | 0.9568 | likely_pathogenic | 0.9609 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
R/W | 0.7351 | likely_pathogenic | 0.7577 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
R/Y | 0.9157 | likely_pathogenic | 0.9261 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.