Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24766 | 74521;74522;74523 | chr2:178571836;178571835;178571834 | chr2:179436563;179436562;179436561 |
N2AB | 23125 | 69598;69599;69600 | chr2:178571836;178571835;178571834 | chr2:179436563;179436562;179436561 |
N2A | 22198 | 66817;66818;66819 | chr2:178571836;178571835;178571834 | chr2:179436563;179436562;179436561 |
N2B | 15701 | 47326;47327;47328 | chr2:178571836;178571835;178571834 | chr2:179436563;179436562;179436561 |
Novex-1 | 15826 | 47701;47702;47703 | chr2:178571836;178571835;178571834 | chr2:179436563;179436562;179436561 |
Novex-2 | 15893 | 47902;47903;47904 | chr2:178571836;178571835;178571834 | chr2:179436563;179436562;179436561 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.822 | N | 0.499 | 0.289 | 0.427139414373 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0898 | likely_benign | 0.0875 | benign | -0.596 | Destabilizing | 0.001 | N | 0.23 | neutral | None | None | None | None | N |
S/C | 0.0838 | likely_benign | 0.0939 | benign | -0.301 | Destabilizing | 0.822 | D | 0.499 | neutral | N | 0.520148962 | None | None | N |
S/D | 0.2387 | likely_benign | 0.2855 | benign | 0.053 | Stabilizing | 0.055 | N | 0.347 | neutral | None | None | None | None | N |
S/E | 0.3785 | ambiguous | 0.4288 | ambiguous | -0.016 | Destabilizing | 0.104 | N | 0.35 | neutral | None | None | None | None | N |
S/F | 0.218 | likely_benign | 0.2176 | benign | -1.065 | Destabilizing | 0.667 | D | 0.566 | neutral | None | None | None | None | N |
S/G | 0.0933 | likely_benign | 0.0979 | benign | -0.755 | Destabilizing | 0.019 | N | 0.313 | neutral | N | 0.485497671 | None | None | N |
S/H | 0.2039 | likely_benign | 0.2504 | benign | -1.301 | Destabilizing | 0.497 | N | 0.497 | neutral | None | None | None | None | N |
S/I | 0.0996 | likely_benign | 0.1128 | benign | -0.296 | Destabilizing | 0.096 | N | 0.547 | neutral | N | 0.487036466 | None | None | N |
S/K | 0.3832 | ambiguous | 0.4567 | ambiguous | -0.552 | Destabilizing | 0.055 | N | 0.344 | neutral | None | None | None | None | N |
S/L | 0.1315 | likely_benign | 0.1277 | benign | -0.296 | Destabilizing | 0.055 | N | 0.554 | neutral | None | None | None | None | N |
S/M | 0.1561 | likely_benign | 0.1641 | benign | 0.095 | Stabilizing | 0.667 | D | 0.496 | neutral | None | None | None | None | N |
S/N | 0.0684 | likely_benign | 0.0818 | benign | -0.314 | Destabilizing | None | N | 0.245 | neutral | N | 0.418560603 | None | None | N |
S/P | 0.4112 | ambiguous | 0.3965 | ambiguous | -0.365 | Destabilizing | 0.364 | N | 0.505 | neutral | None | None | None | None | N |
S/Q | 0.309 | likely_benign | 0.3646 | ambiguous | -0.573 | Destabilizing | 0.22 | N | 0.431 | neutral | None | None | None | None | N |
S/R | 0.363 | ambiguous | 0.4315 | ambiguous | -0.367 | Destabilizing | 0.175 | N | 0.489 | neutral | N | 0.503659357 | None | None | N |
S/T | 0.0621 | likely_benign | 0.0629 | benign | -0.418 | Destabilizing | None | N | 0.251 | neutral | N | 0.434434132 | None | None | N |
S/V | 0.1166 | likely_benign | 0.1257 | benign | -0.365 | Destabilizing | 0.002 | N | 0.413 | neutral | None | None | None | None | N |
S/W | 0.3544 | ambiguous | 0.3826 | ambiguous | -1.02 | Destabilizing | 0.958 | D | 0.56 | neutral | None | None | None | None | N |
S/Y | 0.156 | likely_benign | 0.1724 | benign | -0.763 | Destabilizing | 0.859 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.