Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24781 | 74566;74567;74568 | chr2:178571791;178571790;178571789 | chr2:179436518;179436517;179436516 |
N2AB | 23140 | 69643;69644;69645 | chr2:178571791;178571790;178571789 | chr2:179436518;179436517;179436516 |
N2A | 22213 | 66862;66863;66864 | chr2:178571791;178571790;178571789 | chr2:179436518;179436517;179436516 |
N2B | 15716 | 47371;47372;47373 | chr2:178571791;178571790;178571789 | chr2:179436518;179436517;179436516 |
Novex-1 | 15841 | 47746;47747;47748 | chr2:178571791;178571790;178571789 | chr2:179436518;179436517;179436516 |
Novex-2 | 15908 | 47947;47948;47949 | chr2:178571791;178571790;178571789 | chr2:179436518;179436517;179436516 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.309 | N | 0.419 | 0.264 | 0.258283824007 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85941E-06 | 0 | 0 |
E/D | None | None | 0.001 | N | 0.176 | 0.071 | 0.104622674875 | gnomAD-4.0.0 | 1.36864E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1961 | likely_benign | 0.1934 | benign | -0.313 | Destabilizing | 0.309 | N | 0.419 | neutral | N | 0.502098266 | None | None | I |
E/C | 0.8621 | likely_pathogenic | 0.8562 | pathogenic | 0.045 | Stabilizing | 0.996 | D | 0.442 | neutral | None | None | None | None | I |
E/D | 0.0798 | likely_benign | 0.0759 | benign | -0.262 | Destabilizing | 0.001 | N | 0.176 | neutral | N | 0.438913579 | None | None | I |
E/F | 0.8231 | likely_pathogenic | 0.8196 | pathogenic | -0.337 | Destabilizing | 0.953 | D | 0.423 | neutral | None | None | None | None | I |
E/G | 0.1861 | likely_benign | 0.1805 | benign | -0.481 | Destabilizing | 0.521 | D | 0.431 | neutral | N | 0.512680619 | None | None | I |
E/H | 0.5824 | likely_pathogenic | 0.5761 | pathogenic | -0.044 | Destabilizing | 0.984 | D | 0.373 | neutral | None | None | None | None | I |
E/I | 0.5171 | ambiguous | 0.5133 | ambiguous | 0.084 | Stabilizing | 0.953 | D | 0.434 | neutral | None | None | None | None | I |
E/K | 0.2638 | likely_benign | 0.2537 | benign | 0.338 | Stabilizing | 0.684 | D | 0.446 | neutral | N | 0.511603184 | None | None | I |
E/L | 0.5372 | ambiguous | 0.5386 | ambiguous | 0.084 | Stabilizing | 0.91 | D | 0.405 | neutral | None | None | None | None | I |
E/M | 0.5747 | likely_pathogenic | 0.5758 | pathogenic | 0.187 | Stabilizing | 0.996 | D | 0.413 | neutral | None | None | None | None | I |
E/N | 0.233 | likely_benign | 0.2227 | benign | 0.147 | Stabilizing | 0.742 | D | 0.395 | neutral | None | None | None | None | I |
E/P | 0.7162 | likely_pathogenic | 0.7123 | pathogenic | -0.028 | Destabilizing | 0.953 | D | 0.381 | neutral | None | None | None | None | I |
E/Q | 0.2358 | likely_benign | 0.2329 | benign | 0.16 | Stabilizing | 0.684 | D | 0.427 | neutral | N | 0.515182207 | None | None | I |
E/R | 0.4173 | ambiguous | 0.4056 | ambiguous | 0.517 | Stabilizing | 0.91 | D | 0.385 | neutral | None | None | None | None | I |
E/S | 0.2084 | likely_benign | 0.2025 | benign | -0.032 | Destabilizing | 0.037 | N | 0.289 | neutral | None | None | None | None | I |
E/T | 0.2722 | likely_benign | 0.2641 | benign | 0.101 | Stabilizing | 0.59 | D | 0.396 | neutral | None | None | None | None | I |
E/V | 0.3256 | likely_benign | 0.322 | benign | -0.028 | Destabilizing | 0.884 | D | 0.403 | neutral | N | 0.477789749 | None | None | I |
E/W | 0.9012 | likely_pathogenic | 0.8989 | pathogenic | -0.243 | Destabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | I |
E/Y | 0.6846 | likely_pathogenic | 0.6752 | pathogenic | -0.108 | Destabilizing | 0.984 | D | 0.418 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.