Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24803 | 74632;74633;74634 | chr2:178571725;178571724;178571723 | chr2:179436452;179436451;179436450 |
N2AB | 23162 | 69709;69710;69711 | chr2:178571725;178571724;178571723 | chr2:179436452;179436451;179436450 |
N2A | 22235 | 66928;66929;66930 | chr2:178571725;178571724;178571723 | chr2:179436452;179436451;179436450 |
N2B | 15738 | 47437;47438;47439 | chr2:178571725;178571724;178571723 | chr2:179436452;179436451;179436450 |
Novex-1 | 15863 | 47812;47813;47814 | chr2:178571725;178571724;178571723 | chr2:179436452;179436451;179436450 |
Novex-2 | 15930 | 48013;48014;48015 | chr2:178571725;178571724;178571723 | chr2:179436452;179436451;179436450 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.104 | N | 0.665 | 0.37 | 0.546131560702 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | None | None | None | N | 0.211 | 0.033 | 0.241664281697 | gnomAD-4.0.0 | 1.59193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85954E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8806 | likely_pathogenic | 0.8835 | pathogenic | -2.079 | Highly Destabilizing | 0.104 | N | 0.665 | neutral | N | 0.488224683 | None | None | N |
V/C | 0.9159 | likely_pathogenic | 0.912 | pathogenic | -1.617 | Destabilizing | 0.968 | D | 0.753 | deleterious | None | None | None | None | N |
V/D | 0.9904 | likely_pathogenic | 0.9906 | pathogenic | -2.813 | Highly Destabilizing | 0.667 | D | 0.859 | deleterious | D | 0.522965163 | None | None | N |
V/E | 0.9837 | likely_pathogenic | 0.9852 | pathogenic | -2.567 | Highly Destabilizing | 0.726 | D | 0.83 | deleterious | None | None | None | None | N |
V/F | 0.4273 | ambiguous | 0.4242 | ambiguous | -1.169 | Destabilizing | 0.497 | N | 0.787 | deleterious | N | 0.50359346 | None | None | N |
V/G | 0.9257 | likely_pathogenic | 0.9301 | pathogenic | -2.641 | Highly Destabilizing | 0.667 | D | 0.858 | deleterious | D | 0.522965163 | None | None | N |
V/H | 0.9872 | likely_pathogenic | 0.9875 | pathogenic | -2.471 | Highly Destabilizing | 0.968 | D | 0.839 | deleterious | None | None | None | None | N |
V/I | 0.0554 | likely_benign | 0.0532 | benign | -0.492 | Destabilizing | None | N | 0.211 | neutral | N | 0.462849232 | None | None | N |
V/K | 0.9827 | likely_pathogenic | 0.9838 | pathogenic | -1.638 | Destabilizing | 0.726 | D | 0.83 | deleterious | None | None | None | None | N |
V/L | 0.272 | likely_benign | 0.2592 | benign | -0.492 | Destabilizing | 0.009 | N | 0.473 | neutral | N | 0.474836228 | None | None | N |
V/M | 0.3636 | ambiguous | 0.3518 | ambiguous | -0.633 | Destabilizing | 0.567 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/N | 0.9656 | likely_pathogenic | 0.9645 | pathogenic | -2.053 | Highly Destabilizing | 0.89 | D | 0.837 | deleterious | None | None | None | None | N |
V/P | 0.9791 | likely_pathogenic | 0.9794 | pathogenic | -0.996 | Destabilizing | 0.89 | D | 0.812 | deleterious | None | None | None | None | N |
V/Q | 0.9797 | likely_pathogenic | 0.981 | pathogenic | -1.837 | Destabilizing | 0.89 | D | 0.826 | deleterious | None | None | None | None | N |
V/R | 0.9715 | likely_pathogenic | 0.9743 | pathogenic | -1.567 | Destabilizing | 0.726 | D | 0.84 | deleterious | None | None | None | None | N |
V/S | 0.9505 | likely_pathogenic | 0.9519 | pathogenic | -2.654 | Highly Destabilizing | 0.726 | D | 0.821 | deleterious | None | None | None | None | N |
V/T | 0.9065 | likely_pathogenic | 0.9058 | pathogenic | -2.262 | Highly Destabilizing | 0.272 | N | 0.684 | prob.neutral | None | None | None | None | N |
V/W | 0.9777 | likely_pathogenic | 0.9775 | pathogenic | -1.755 | Destabilizing | 0.968 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9142 | likely_pathogenic | 0.9157 | pathogenic | -1.367 | Destabilizing | 0.726 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.