Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24816 | 74671;74672;74673 | chr2:178571686;178571685;178571684 | chr2:179436413;179436412;179436411 |
N2AB | 23175 | 69748;69749;69750 | chr2:178571686;178571685;178571684 | chr2:179436413;179436412;179436411 |
N2A | 22248 | 66967;66968;66969 | chr2:178571686;178571685;178571684 | chr2:179436413;179436412;179436411 |
N2B | 15751 | 47476;47477;47478 | chr2:178571686;178571685;178571684 | chr2:179436413;179436412;179436411 |
Novex-1 | 15876 | 47851;47852;47853 | chr2:178571686;178571685;178571684 | chr2:179436413;179436412;179436411 |
Novex-2 | 15943 | 48052;48053;48054 | chr2:178571686;178571685;178571684 | chr2:179436413;179436412;179436411 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1304130047 | -0.251 | 0.003 | N | 0.195 | 0.084 | 0.285698343383 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1304130047 | -0.251 | 0.003 | N | 0.195 | 0.084 | 0.285698343383 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7767E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7224 | likely_pathogenic | 0.7297 | pathogenic | -1.656 | Destabilizing | 0.517 | D | 0.627 | neutral | N | 0.504444331 | None | None | N |
V/C | 0.9166 | likely_pathogenic | 0.9182 | pathogenic | -1.259 | Destabilizing | 0.996 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/D | 0.9895 | likely_pathogenic | 0.9893 | pathogenic | -1.49 | Destabilizing | 0.983 | D | 0.819 | deleterious | D | 0.531031283 | None | None | N |
V/E | 0.9721 | likely_pathogenic | 0.9711 | pathogenic | -1.351 | Destabilizing | 0.987 | D | 0.775 | deleterious | None | None | None | None | N |
V/F | 0.6564 | likely_pathogenic | 0.6309 | pathogenic | -0.954 | Destabilizing | 0.901 | D | 0.691 | prob.neutral | N | 0.485326118 | None | None | N |
V/G | 0.8804 | likely_pathogenic | 0.8823 | pathogenic | -2.128 | Highly Destabilizing | 0.949 | D | 0.797 | deleterious | D | 0.531791751 | None | None | N |
V/H | 0.9916 | likely_pathogenic | 0.9913 | pathogenic | -1.809 | Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | N |
V/I | 0.082 | likely_benign | 0.0795 | benign | -0.396 | Destabilizing | 0.003 | N | 0.195 | neutral | N | 0.484198444 | None | None | N |
V/K | 0.981 | likely_pathogenic | 0.9797 | pathogenic | -1.374 | Destabilizing | 0.961 | D | 0.776 | deleterious | None | None | None | None | N |
V/L | 0.3299 | likely_benign | 0.3224 | benign | -0.396 | Destabilizing | 0.075 | N | 0.467 | neutral | N | 0.462427944 | None | None | N |
V/M | 0.454 | ambiguous | 0.4331 | ambiguous | -0.451 | Destabilizing | 0.923 | D | 0.624 | neutral | None | None | None | None | N |
V/N | 0.9657 | likely_pathogenic | 0.9653 | pathogenic | -1.408 | Destabilizing | 0.987 | D | 0.825 | deleterious | None | None | None | None | N |
V/P | 0.8428 | likely_pathogenic | 0.8533 | pathogenic | -0.783 | Destabilizing | 0.987 | D | 0.786 | deleterious | None | None | None | None | N |
V/Q | 0.9719 | likely_pathogenic | 0.97 | pathogenic | -1.341 | Destabilizing | 0.987 | D | 0.797 | deleterious | None | None | None | None | N |
V/R | 0.9704 | likely_pathogenic | 0.9695 | pathogenic | -1.17 | Destabilizing | 0.987 | D | 0.826 | deleterious | None | None | None | None | N |
V/S | 0.9103 | likely_pathogenic | 0.9143 | pathogenic | -2.077 | Highly Destabilizing | 0.961 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/T | 0.835 | likely_pathogenic | 0.832 | pathogenic | -1.795 | Destabilizing | 0.775 | D | 0.645 | neutral | None | None | None | None | N |
V/W | 0.9898 | likely_pathogenic | 0.9882 | pathogenic | -1.321 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
V/Y | 0.9592 | likely_pathogenic | 0.9577 | pathogenic | -0.95 | Destabilizing | 0.961 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.