Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24818 | 74677;74678;74679 | chr2:178571680;178571679;178571678 | chr2:179436407;179436406;179436405 |
N2AB | 23177 | 69754;69755;69756 | chr2:178571680;178571679;178571678 | chr2:179436407;179436406;179436405 |
N2A | 22250 | 66973;66974;66975 | chr2:178571680;178571679;178571678 | chr2:179436407;179436406;179436405 |
N2B | 15753 | 47482;47483;47484 | chr2:178571680;178571679;178571678 | chr2:179436407;179436406;179436405 |
Novex-1 | 15878 | 47857;47858;47859 | chr2:178571680;178571679;178571678 | chr2:179436407;179436406;179436405 |
Novex-2 | 15945 | 48058;48059;48060 | chr2:178571680;178571679;178571678 | chr2:179436407;179436406;179436405 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/V | None | None | None | N | 0.139 | 0.073 | 0.194818534648 | gnomAD-4.0.0 | 2.05298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79917E-06 | 0 | 1.65689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.4421 | ambiguous | 0.396 | ambiguous | -1.749 | Destabilizing | 0.025 | N | 0.339 | neutral | None | None | None | None | N |
M/C | 0.6313 | likely_pathogenic | 0.5986 | pathogenic | -1.513 | Destabilizing | 0.667 | D | 0.495 | neutral | None | None | None | None | N |
M/D | 0.9104 | likely_pathogenic | 0.8964 | pathogenic | -0.467 | Destabilizing | 0.635 | D | 0.605 | neutral | None | None | None | None | N |
M/E | 0.6824 | likely_pathogenic | 0.6404 | pathogenic | -0.405 | Destabilizing | 0.364 | N | 0.539 | neutral | None | None | None | None | N |
M/F | 0.2021 | likely_benign | 0.1898 | benign | -0.632 | Destabilizing | None | N | 0.166 | neutral | None | None | None | None | N |
M/G | 0.7694 | likely_pathogenic | 0.7319 | pathogenic | -2.105 | Highly Destabilizing | 0.364 | N | 0.509 | neutral | None | None | None | None | N |
M/H | 0.6943 | likely_pathogenic | 0.6569 | pathogenic | -1.154 | Destabilizing | 0.859 | D | 0.527 | neutral | None | None | None | None | N |
M/I | 0.1343 | likely_benign | 0.113 | benign | -0.813 | Destabilizing | None | N | 0.139 | neutral | N | 0.30025806 | None | None | N |
M/K | 0.3925 | ambiguous | 0.3562 | ambiguous | -0.592 | Destabilizing | 0.301 | N | 0.488 | neutral | N | 0.407543027 | None | None | N |
M/L | 0.1004 | likely_benign | 0.0956 | benign | -0.813 | Destabilizing | None | N | 0.121 | neutral | N | 0.348916011 | None | None | N |
M/N | 0.6892 | likely_pathogenic | 0.6432 | pathogenic | -0.547 | Destabilizing | 0.859 | D | 0.615 | neutral | None | None | None | None | N |
M/P | 0.6386 | likely_pathogenic | 0.6525 | pathogenic | -1.098 | Destabilizing | 0.859 | D | 0.61 | neutral | None | None | None | None | N |
M/Q | 0.4744 | ambiguous | 0.4411 | ambiguous | -0.555 | Destabilizing | 0.859 | D | 0.516 | neutral | None | None | None | None | N |
M/R | 0.3557 | ambiguous | 0.3226 | benign | -0.199 | Destabilizing | 0.301 | N | 0.565 | neutral | N | 0.419221458 | None | None | N |
M/S | 0.613 | likely_pathogenic | 0.5554 | ambiguous | -1.221 | Destabilizing | 0.104 | N | 0.426 | neutral | None | None | None | None | N |
M/T | 0.3036 | likely_benign | 0.2642 | benign | -1.032 | Destabilizing | 0.081 | N | 0.408 | neutral | N | 0.413660923 | None | None | N |
M/V | 0.0704 | likely_benign | 0.0647 | benign | -1.098 | Destabilizing | None | N | 0.139 | neutral | N | 0.292827868 | None | None | N |
M/W | 0.5537 | ambiguous | 0.537 | ambiguous | -0.593 | Destabilizing | 0.859 | D | 0.494 | neutral | None | None | None | None | N |
M/Y | 0.5199 | ambiguous | 0.5023 | ambiguous | -0.61 | Destabilizing | 0.124 | N | 0.473 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.