Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24821 | 74686;74687;74688 | chr2:178571671;178571670;178571669 | chr2:179436398;179436397;179436396 |
N2AB | 23180 | 69763;69764;69765 | chr2:178571671;178571670;178571669 | chr2:179436398;179436397;179436396 |
N2A | 22253 | 66982;66983;66984 | chr2:178571671;178571670;178571669 | chr2:179436398;179436397;179436396 |
N2B | 15756 | 47491;47492;47493 | chr2:178571671;178571670;178571669 | chr2:179436398;179436397;179436396 |
Novex-1 | 15881 | 47866;47867;47868 | chr2:178571671;178571670;178571669 | chr2:179436398;179436397;179436396 |
Novex-2 | 15948 | 48067;48068;48069 | chr2:178571671;178571670;178571669 | chr2:179436398;179436397;179436396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1250205827 | None | 0.999 | N | 0.52 | 0.431 | 0.656083742682 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1250205827 | None | 0.999 | N | 0.52 | 0.431 | 0.656083742682 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5318 | ambiguous | 0.5284 | ambiguous | -1.409 | Destabilizing | 0.999 | D | 0.52 | neutral | N | 0.48413435 | None | None | N |
V/C | 0.8546 | likely_pathogenic | 0.8519 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
V/D | 0.9026 | likely_pathogenic | 0.8901 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/E | 0.7409 | likely_pathogenic | 0.724 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.525204705 | None | None | N |
V/F | 0.5104 | ambiguous | 0.4796 | ambiguous | -1.283 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
V/G | 0.7056 | likely_pathogenic | 0.6884 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.515369337 | None | None | N |
V/H | 0.9244 | likely_pathogenic | 0.9175 | pathogenic | -1.246 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
V/I | 0.075 | likely_benign | 0.0738 | benign | -0.734 | Destabilizing | 0.998 | D | 0.478 | neutral | None | None | None | None | N |
V/K | 0.7302 | likely_pathogenic | 0.7023 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.4751 | ambiguous | 0.452 | ambiguous | -0.734 | Destabilizing | 0.997 | D | 0.507 | neutral | N | 0.479993293 | None | None | N |
V/M | 0.2946 | likely_benign | 0.2792 | benign | -0.687 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.503506052 | None | None | N |
V/N | 0.7785 | likely_pathogenic | 0.7597 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.9282 | likely_pathogenic | 0.9013 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.7486 | likely_pathogenic | 0.7297 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.7409 | likely_pathogenic | 0.7245 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/S | 0.7065 | likely_pathogenic | 0.7055 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/T | 0.5138 | ambiguous | 0.5142 | ambiguous | -1.33 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
V/W | 0.9662 | likely_pathogenic | 0.9594 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.8435 | likely_pathogenic | 0.8326 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.