Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24822 | 74689;74690;74691 | chr2:178571668;178571667;178571666 | chr2:179436395;179436394;179436393 |
N2AB | 23181 | 69766;69767;69768 | chr2:178571668;178571667;178571666 | chr2:179436395;179436394;179436393 |
N2A | 22254 | 66985;66986;66987 | chr2:178571668;178571667;178571666 | chr2:179436395;179436394;179436393 |
N2B | 15757 | 47494;47495;47496 | chr2:178571668;178571667;178571666 | chr2:179436395;179436394;179436393 |
Novex-1 | 15882 | 47869;47870;47871 | chr2:178571668;178571667;178571666 | chr2:179436395;179436394;179436393 |
Novex-2 | 15949 | 48070;48071;48072 | chr2:178571668;178571667;178571666 | chr2:179436395;179436394;179436393 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs1479629836 | None | 0.967 | N | 0.627 | 0.393 | 0.509346181843 | gnomAD-4.0.0 | 4.7761E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57859E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2707 | likely_benign | 0.2583 | benign | -1.077 | Destabilizing | 0.63 | D | 0.447 | neutral | D | 0.528085294 | None | None | N |
T/C | 0.7049 | likely_pathogenic | 0.695 | pathogenic | -0.763 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
T/D | 0.673 | likely_pathogenic | 0.6632 | pathogenic | -0.991 | Destabilizing | 0.975 | D | 0.559 | neutral | None | None | None | None | N |
T/E | 0.7907 | likely_pathogenic | 0.7715 | pathogenic | -0.902 | Destabilizing | 0.975 | D | 0.565 | neutral | None | None | None | None | N |
T/F | 0.7225 | likely_pathogenic | 0.7189 | pathogenic | -0.928 | Destabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | N |
T/G | 0.4475 | ambiguous | 0.413 | ambiguous | -1.413 | Destabilizing | 0.845 | D | 0.491 | neutral | None | None | None | None | N |
T/H | 0.5793 | likely_pathogenic | 0.5671 | pathogenic | -1.635 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
T/I | 0.8365 | likely_pathogenic | 0.83 | pathogenic | -0.24 | Destabilizing | 0.983 | D | 0.623 | neutral | N | 0.497785287 | None | None | N |
T/K | 0.6202 | likely_pathogenic | 0.5968 | pathogenic | -0.828 | Destabilizing | 0.967 | D | 0.565 | neutral | N | 0.47717259 | None | None | N |
T/L | 0.3376 | likely_benign | 0.3219 | benign | -0.24 | Destabilizing | 0.916 | D | 0.507 | neutral | None | None | None | None | N |
T/M | 0.2055 | likely_benign | 0.194 | benign | 0.01 | Stabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
T/N | 0.2675 | likely_benign | 0.2698 | benign | -1.114 | Destabilizing | 0.975 | D | 0.555 | neutral | None | None | None | None | N |
T/P | 0.8985 | likely_pathogenic | 0.8813 | pathogenic | -0.487 | Destabilizing | 0.983 | D | 0.622 | neutral | D | 0.524283333 | None | None | N |
T/Q | 0.577 | likely_pathogenic | 0.5612 | ambiguous | -1.151 | Destabilizing | 0.975 | D | 0.616 | neutral | None | None | None | None | N |
T/R | 0.5795 | likely_pathogenic | 0.5471 | ambiguous | -0.736 | Destabilizing | 0.967 | D | 0.627 | neutral | N | 0.520561889 | None | None | N |
T/S | 0.1445 | likely_benign | 0.1432 | benign | -1.357 | Destabilizing | 0.099 | N | 0.212 | neutral | N | 0.425014067 | None | None | N |
T/V | 0.6403 | likely_pathogenic | 0.6262 | pathogenic | -0.487 | Destabilizing | 0.916 | D | 0.474 | neutral | None | None | None | None | N |
T/W | 0.9325 | likely_pathogenic | 0.925 | pathogenic | -0.928 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
T/Y | 0.7199 | likely_pathogenic | 0.7114 | pathogenic | -0.647 | Destabilizing | 0.996 | D | 0.668 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.