Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24824 | 74695;74696;74697 | chr2:178571662;178571661;178571660 | chr2:179436389;179436388;179436387 |
N2AB | 23183 | 69772;69773;69774 | chr2:178571662;178571661;178571660 | chr2:179436389;179436388;179436387 |
N2A | 22256 | 66991;66992;66993 | chr2:178571662;178571661;178571660 | chr2:179436389;179436388;179436387 |
N2B | 15759 | 47500;47501;47502 | chr2:178571662;178571661;178571660 | chr2:179436389;179436388;179436387 |
Novex-1 | 15884 | 47875;47876;47877 | chr2:178571662;178571661;178571660 | chr2:179436389;179436388;179436387 |
Novex-2 | 15951 | 48076;48077;48078 | chr2:178571662;178571661;178571660 | chr2:179436389;179436388;179436387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 1.0 | N | 0.729 | 0.461 | 0.724662712665 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5848 | likely_pathogenic | 0.5435 | ambiguous | -0.429 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | N | 0.484170348 | None | None | N |
D/C | 0.9166 | likely_pathogenic | 0.9131 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/E | 0.2944 | likely_benign | 0.2964 | benign | -0.593 | Destabilizing | 0.767 | D | 0.308 | neutral | N | 0.463897742 | None | None | N |
D/F | 0.929 | likely_pathogenic | 0.9179 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/G | 0.5832 | likely_pathogenic | 0.552 | ambiguous | -0.651 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | N | 0.473129985 | None | None | N |
D/H | 0.7864 | likely_pathogenic | 0.7543 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | D | 0.522868688 | None | None | N |
D/I | 0.8636 | likely_pathogenic | 0.8574 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
D/K | 0.8724 | likely_pathogenic | 0.859 | pathogenic | 0.086 | Stabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
D/L | 0.8429 | likely_pathogenic | 0.8299 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/M | 0.9204 | likely_pathogenic | 0.9068 | pathogenic | 0.604 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/N | 0.2492 | likely_benign | 0.2119 | benign | -0.136 | Destabilizing | 0.999 | D | 0.651 | neutral | N | 0.482288715 | None | None | N |
D/P | 0.9893 | likely_pathogenic | 0.9883 | pathogenic | -0.045 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/Q | 0.7624 | likely_pathogenic | 0.726 | pathogenic | -0.119 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
D/R | 0.8985 | likely_pathogenic | 0.8815 | pathogenic | None | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/S | 0.3371 | likely_benign | 0.2897 | benign | -0.278 | Destabilizing | 0.997 | D | 0.623 | neutral | None | None | None | None | N |
D/T | 0.5156 | ambiguous | 0.4653 | ambiguous | -0.103 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/V | 0.6884 | likely_pathogenic | 0.6788 | pathogenic | -0.045 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.504173934 | None | None | N |
D/W | 0.9885 | likely_pathogenic | 0.9872 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/Y | 0.6947 | likely_pathogenic | 0.6733 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.503920445 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.