Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24826 | 74701;74702;74703 | chr2:178571656;178571655;178571654 | chr2:179436383;179436382;179436381 |
N2AB | 23185 | 69778;69779;69780 | chr2:178571656;178571655;178571654 | chr2:179436383;179436382;179436381 |
N2A | 22258 | 66997;66998;66999 | chr2:178571656;178571655;178571654 | chr2:179436383;179436382;179436381 |
N2B | 15761 | 47506;47507;47508 | chr2:178571656;178571655;178571654 | chr2:179436383;179436382;179436381 |
Novex-1 | 15886 | 47881;47882;47883 | chr2:178571656;178571655;178571654 | chr2:179436383;179436382;179436381 |
Novex-2 | 15953 | 48082;48083;48084 | chr2:178571656;178571655;178571654 | chr2:179436383;179436382;179436381 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs764053971 | -3.014 | 0.741 | N | 0.811 | 0.44 | 0.838227082898 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/N | rs764053971 | -3.014 | 0.741 | N | 0.811 | 0.44 | 0.838227082898 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6868 | likely_pathogenic | 0.6816 | pathogenic | -2.928 | Highly Destabilizing | 0.035 | N | 0.621 | neutral | None | None | None | None | N |
I/C | 0.7239 | likely_pathogenic | 0.7061 | pathogenic | -2.788 | Highly Destabilizing | 0.001 | N | 0.559 | neutral | None | None | None | None | N |
I/D | 0.9947 | likely_pathogenic | 0.995 | pathogenic | -3.394 | Highly Destabilizing | 0.555 | D | 0.811 | deleterious | None | None | None | None | N |
I/E | 0.9847 | likely_pathogenic | 0.9865 | pathogenic | -3.155 | Highly Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
I/F | 0.4205 | ambiguous | 0.4134 | ambiguous | -1.789 | Destabilizing | 0.317 | N | 0.733 | prob.delet. | N | 0.471221108 | None | None | N |
I/G | 0.9659 | likely_pathogenic | 0.964 | pathogenic | -3.467 | Highly Destabilizing | 0.555 | D | 0.778 | deleterious | None | None | None | None | N |
I/H | 0.9755 | likely_pathogenic | 0.9778 | pathogenic | -2.787 | Highly Destabilizing | 0.935 | D | 0.777 | deleterious | None | None | None | None | N |
I/K | 0.9656 | likely_pathogenic | 0.9689 | pathogenic | -2.259 | Highly Destabilizing | 0.555 | D | 0.798 | deleterious | None | None | None | None | N |
I/L | 0.1417 | likely_benign | 0.1344 | benign | -1.349 | Destabilizing | None | N | 0.286 | neutral | N | 0.462028086 | None | None | N |
I/M | 0.1222 | likely_benign | 0.1202 | benign | -1.7 | Destabilizing | 0.317 | N | 0.663 | neutral | N | 0.510152894 | None | None | N |
I/N | 0.9357 | likely_pathogenic | 0.9397 | pathogenic | -2.717 | Highly Destabilizing | 0.741 | D | 0.811 | deleterious | N | 0.506468567 | None | None | N |
I/P | 0.9959 | likely_pathogenic | 0.995 | pathogenic | -1.86 | Destabilizing | 0.791 | D | 0.815 | deleterious | None | None | None | None | N |
I/Q | 0.9608 | likely_pathogenic | 0.9631 | pathogenic | -2.573 | Highly Destabilizing | 0.791 | D | 0.799 | deleterious | None | None | None | None | N |
I/R | 0.9475 | likely_pathogenic | 0.9507 | pathogenic | -1.97 | Destabilizing | 0.555 | D | 0.813 | deleterious | None | None | None | None | N |
I/S | 0.8673 | likely_pathogenic | 0.8717 | pathogenic | -3.427 | Highly Destabilizing | 0.117 | N | 0.758 | deleterious | N | 0.506215077 | None | None | N |
I/T | 0.7901 | likely_pathogenic | 0.7945 | pathogenic | -3.036 | Highly Destabilizing | 0.062 | N | 0.733 | prob.delet. | N | 0.499378222 | None | None | N |
I/V | 0.0603 | likely_benign | 0.064 | benign | -1.86 | Destabilizing | None | N | 0.199 | neutral | N | 0.393704151 | None | None | N |
I/W | 0.979 | likely_pathogenic | 0.9773 | pathogenic | -2.067 | Highly Destabilizing | 0.935 | D | 0.772 | deleterious | None | None | None | None | N |
I/Y | 0.8986 | likely_pathogenic | 0.8999 | pathogenic | -1.883 | Destabilizing | 0.555 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.