Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2483 | 7672;7673;7674 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
N2AB | 2483 | 7672;7673;7674 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
N2A | 2483 | 7672;7673;7674 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
N2B | 2437 | 7534;7535;7536 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
Novex-1 | 2437 | 7534;7535;7536 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
Novex-2 | 2437 | 7534;7535;7536 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
Novex-3 | 2483 | 7672;7673;7674 | chr2:178773609;178773608;178773607 | chr2:179638336;179638335;179638334 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.003 | N | 0.148 | 0.251 | 0.255270683199 | gnomAD-4.0.0 | 6.84109E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99318E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1297 | likely_benign | 0.1295 | benign | -0.52 | Destabilizing | 0.183 | N | 0.339 | neutral | N | 0.501854428 | None | None | N |
E/C | 0.6119 | likely_pathogenic | 0.6001 | pathogenic | -0.315 | Destabilizing | 0.983 | D | 0.287 | neutral | None | None | None | None | N |
E/D | 0.1038 | likely_benign | 0.1083 | benign | -0.528 | Destabilizing | 0.002 | N | 0.195 | neutral | N | 0.505798843 | None | None | N |
E/F | 0.5322 | ambiguous | 0.5201 | ambiguous | -0.209 | Destabilizing | 0.836 | D | 0.304 | neutral | None | None | None | None | N |
E/G | 0.1489 | likely_benign | 0.1484 | benign | -0.753 | Destabilizing | 0.213 | N | 0.355 | neutral | N | 0.515339559 | None | None | N |
E/H | 0.2515 | likely_benign | 0.2461 | benign | 0.059 | Stabilizing | 0.005 | N | 0.194 | neutral | None | None | None | None | N |
E/I | 0.1873 | likely_benign | 0.184 | benign | 0.077 | Stabilizing | 0.836 | D | 0.317 | neutral | None | None | None | None | N |
E/K | 0.077 | likely_benign | 0.0752 | benign | 0.029 | Stabilizing | 0.003 | N | 0.148 | neutral | N | 0.401745938 | None | None | N |
E/L | 0.2502 | likely_benign | 0.2453 | benign | 0.077 | Stabilizing | 0.418 | N | 0.391 | neutral | None | None | None | None | N |
E/M | 0.2865 | likely_benign | 0.28 | benign | 0.107 | Stabilizing | 0.983 | D | 0.277 | neutral | None | None | None | None | N |
E/N | 0.134 | likely_benign | 0.1358 | benign | -0.402 | Destabilizing | 0.002 | N | 0.251 | neutral | None | None | None | None | N |
E/P | 0.8168 | likely_pathogenic | 0.8142 | pathogenic | -0.102 | Destabilizing | 0.836 | D | 0.355 | neutral | None | None | None | None | N |
E/Q | 0.088 | likely_benign | 0.0874 | benign | -0.333 | Destabilizing | 0.007 | N | 0.203 | neutral | N | 0.443969642 | None | None | N |
E/R | 0.1414 | likely_benign | 0.1364 | benign | 0.368 | Stabilizing | 0.264 | N | 0.289 | neutral | None | None | None | None | N |
E/S | 0.1374 | likely_benign | 0.1374 | benign | -0.564 | Destabilizing | 0.129 | N | 0.301 | neutral | None | None | None | None | N |
E/T | 0.14 | likely_benign | 0.1396 | benign | -0.371 | Destabilizing | 0.418 | N | 0.353 | neutral | None | None | None | None | N |
E/V | 0.128 | likely_benign | 0.1262 | benign | -0.102 | Destabilizing | 0.523 | D | 0.346 | neutral | N | 0.449026756 | None | None | N |
E/W | 0.7777 | likely_pathogenic | 0.7716 | pathogenic | None | Stabilizing | 0.983 | D | 0.311 | neutral | None | None | None | None | N |
E/Y | 0.3823 | ambiguous | 0.3766 | ambiguous | 0.036 | Stabilizing | 0.716 | D | 0.316 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.