Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24836 | 74731;74732;74733 | chr2:178571626;178571625;178571624 | chr2:179436353;179436352;179436351 |
N2AB | 23195 | 69808;69809;69810 | chr2:178571626;178571625;178571624 | chr2:179436353;179436352;179436351 |
N2A | 22268 | 67027;67028;67029 | chr2:178571626;178571625;178571624 | chr2:179436353;179436352;179436351 |
N2B | 15771 | 47536;47537;47538 | chr2:178571626;178571625;178571624 | chr2:179436353;179436352;179436351 |
Novex-1 | 15896 | 47911;47912;47913 | chr2:178571626;178571625;178571624 | chr2:179436353;179436352;179436351 |
Novex-2 | 15963 | 48112;48113;48114 | chr2:178571626;178571625;178571624 | chr2:179436353;179436352;179436351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs759645630 | -0.335 | 0.995 | D | 0.711 | 0.346 | 0.73550016056 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
D/Y | rs759645630 | -0.335 | 0.995 | D | 0.711 | 0.346 | 0.73550016056 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7835E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5164 | ambiguous | 0.5471 | ambiguous | -0.833 | Destabilizing | 0.811 | D | 0.623 | neutral | N | 0.48104325 | None | None | N |
D/C | 0.8837 | likely_pathogenic | 0.8938 | pathogenic | -0.263 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
D/E | 0.5063 | ambiguous | 0.4876 | ambiguous | -0.679 | Destabilizing | 0.103 | N | 0.178 | neutral | N | 0.471964669 | None | None | N |
D/F | 0.9224 | likely_pathogenic | 0.9294 | pathogenic | -0.639 | Destabilizing | 0.988 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/G | 0.5513 | ambiguous | 0.5569 | ambiguous | -1.143 | Destabilizing | 0.896 | D | 0.599 | neutral | N | 0.511201827 | None | None | N |
D/H | 0.7038 | likely_pathogenic | 0.7161 | pathogenic | -0.948 | Destabilizing | 0.996 | D | 0.635 | neutral | N | 0.48904542 | None | None | N |
D/I | 0.7904 | likely_pathogenic | 0.8202 | pathogenic | -0.019 | Destabilizing | 0.976 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/K | 0.8144 | likely_pathogenic | 0.8199 | pathogenic | -0.3 | Destabilizing | 0.851 | D | 0.601 | neutral | None | None | None | None | N |
D/L | 0.7727 | likely_pathogenic | 0.7992 | pathogenic | -0.019 | Destabilizing | 0.952 | D | 0.647 | neutral | None | None | None | None | N |
D/M | 0.8892 | likely_pathogenic | 0.9023 | pathogenic | 0.52 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/N | 0.1557 | likely_benign | 0.1743 | benign | -0.705 | Destabilizing | 0.896 | D | 0.561 | neutral | N | 0.502840133 | None | None | N |
D/P | 0.9226 | likely_pathogenic | 0.9335 | pathogenic | -0.267 | Destabilizing | 0.988 | D | 0.635 | neutral | None | None | None | None | N |
D/Q | 0.7561 | likely_pathogenic | 0.7649 | pathogenic | -0.61 | Destabilizing | 0.507 | D | 0.242 | neutral | None | None | None | None | N |
D/R | 0.8192 | likely_pathogenic | 0.8268 | pathogenic | -0.244 | Destabilizing | 0.976 | D | 0.69 | prob.neutral | None | None | None | None | N |
D/S | 0.2496 | likely_benign | 0.2594 | benign | -0.944 | Destabilizing | 0.851 | D | 0.551 | neutral | None | None | None | None | N |
D/T | 0.3283 | likely_benign | 0.3385 | benign | -0.68 | Destabilizing | 0.261 | N | 0.271 | neutral | None | None | None | None | N |
D/V | 0.5991 | likely_pathogenic | 0.6312 | pathogenic | -0.267 | Destabilizing | 0.938 | D | 0.642 | neutral | N | 0.498413489 | None | None | N |
D/W | 0.9853 | likely_pathogenic | 0.9869 | pathogenic | -0.435 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/Y | 0.6741 | likely_pathogenic | 0.6955 | pathogenic | -0.386 | Destabilizing | 0.995 | D | 0.711 | prob.delet. | D | 0.529141498 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.