Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24839 | 74740;74741;74742 | chr2:178571617;178571616;178571615 | chr2:179436344;179436343;179436342 |
N2AB | 23198 | 69817;69818;69819 | chr2:178571617;178571616;178571615 | chr2:179436344;179436343;179436342 |
N2A | 22271 | 67036;67037;67038 | chr2:178571617;178571616;178571615 | chr2:179436344;179436343;179436342 |
N2B | 15774 | 47545;47546;47547 | chr2:178571617;178571616;178571615 | chr2:179436344;179436343;179436342 |
Novex-1 | 15899 | 47920;47921;47922 | chr2:178571617;178571616;178571615 | chr2:179436344;179436343;179436342 |
Novex-2 | 15966 | 48121;48122;48123 | chr2:178571617;178571616;178571615 | chr2:179436344;179436343;179436342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs770901672 | -1.227 | 0.815 | N | 0.55 | 0.18 | 0.183819452728 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/G | rs770901672 | -1.227 | 0.815 | N | 0.55 | 0.18 | 0.183819452728 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/G | rs770901672 | -1.227 | 0.815 | N | 0.55 | 0.18 | 0.183819452728 | gnomAD-4.0.0 | 1.31482E-05 | None | None | None | None | I | None | 4.82509E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/N | rs763157776 | -0.557 | 0.931 | N | 0.653 | 0.309 | 0.27132560031 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 8.72E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/N | rs763157776 | -0.557 | 0.931 | N | 0.653 | 0.309 | 0.27132560031 | gnomAD-4.0.0 | 3.42212E-06 | None | None | None | None | I | None | 0 | 6.71171E-05 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
S/R | rs1301601226 | None | 0.979 | N | 0.631 | 0.37 | 0.246773566709 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/R | rs1301601226 | None | 0.979 | N | 0.631 | 0.37 | 0.246773566709 | gnomAD-4.0.0 | 1.36382E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7803E-05 | 0 | 1.60174E-05 |
S/T | rs763157776 | -0.629 | 0.684 | N | 0.58 | 0.222 | 0.227260227426 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
S/T | rs763157776 | -0.629 | 0.684 | N | 0.58 | 0.222 | 0.227260227426 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/T | rs763157776 | -0.629 | 0.684 | N | 0.58 | 0.222 | 0.227260227426 | gnomAD-4.0.0 | 3.71941E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08657E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1237 | likely_benign | 0.1284 | benign | -0.992 | Destabilizing | 0.206 | N | 0.476 | neutral | None | None | None | None | I |
S/C | 0.0715 | likely_benign | 0.0744 | benign | -0.619 | Destabilizing | 0.003 | N | 0.361 | neutral | N | 0.426747651 | None | None | I |
S/D | 0.9533 | likely_pathogenic | 0.9564 | pathogenic | -0.317 | Destabilizing | 0.947 | D | 0.627 | neutral | None | None | None | None | I |
S/E | 0.9756 | likely_pathogenic | 0.9773 | pathogenic | -0.342 | Destabilizing | 0.947 | D | 0.626 | neutral | None | None | None | None | I |
S/F | 0.6638 | likely_pathogenic | 0.6579 | pathogenic | -1.344 | Destabilizing | 0.953 | D | 0.667 | neutral | None | None | None | None | I |
S/G | 0.1872 | likely_benign | 0.1837 | benign | -1.197 | Destabilizing | 0.815 | D | 0.55 | neutral | N | 0.510741966 | None | None | I |
S/H | 0.8714 | likely_pathogenic | 0.8758 | pathogenic | -1.663 | Destabilizing | 0.996 | D | 0.61 | neutral | None | None | None | None | I |
S/I | 0.5104 | ambiguous | 0.5376 | ambiguous | -0.55 | Destabilizing | 0.884 | D | 0.672 | neutral | N | 0.482297471 | None | None | I |
S/K | 0.9914 | likely_pathogenic | 0.9922 | pathogenic | -0.741 | Destabilizing | 0.854 | D | 0.629 | neutral | None | None | None | None | I |
S/L | 0.366 | ambiguous | 0.3535 | ambiguous | -0.55 | Destabilizing | 0.59 | D | 0.581 | neutral | None | None | None | None | I |
S/M | 0.4771 | ambiguous | 0.4769 | ambiguous | -0.083 | Destabilizing | 0.984 | D | 0.62 | neutral | None | None | None | None | I |
S/N | 0.5652 | likely_pathogenic | 0.6035 | pathogenic | -0.648 | Destabilizing | 0.931 | D | 0.653 | neutral | N | 0.482297471 | None | None | I |
S/P | 0.9792 | likely_pathogenic | 0.9801 | pathogenic | -0.667 | Destabilizing | 0.984 | D | 0.637 | neutral | None | None | None | None | I |
S/Q | 0.9341 | likely_pathogenic | 0.9367 | pathogenic | -0.886 | Destabilizing | 0.984 | D | 0.632 | neutral | None | None | None | None | I |
S/R | 0.9801 | likely_pathogenic | 0.9814 | pathogenic | -0.557 | Destabilizing | 0.979 | D | 0.631 | neutral | N | 0.514998566 | None | None | I |
S/T | 0.165 | likely_benign | 0.1808 | benign | -0.732 | Destabilizing | 0.684 | D | 0.58 | neutral | N | 0.507592591 | None | None | I |
S/V | 0.4037 | ambiguous | 0.4383 | ambiguous | -0.667 | Destabilizing | 0.742 | D | 0.615 | neutral | None | None | None | None | I |
S/W | 0.8589 | likely_pathogenic | 0.8563 | pathogenic | -1.245 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | I |
S/Y | 0.6783 | likely_pathogenic | 0.6742 | pathogenic | -1.01 | Destabilizing | 0.984 | D | 0.666 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.