Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24840 | 74743;74744;74745 | chr2:178571614;178571613;178571612 | chr2:179436341;179436340;179436339 |
N2AB | 23199 | 69820;69821;69822 | chr2:178571614;178571613;178571612 | chr2:179436341;179436340;179436339 |
N2A | 22272 | 67039;67040;67041 | chr2:178571614;178571613;178571612 | chr2:179436341;179436340;179436339 |
N2B | 15775 | 47548;47549;47550 | chr2:178571614;178571613;178571612 | chr2:179436341;179436340;179436339 |
Novex-1 | 15900 | 47923;47924;47925 | chr2:178571614;178571613;178571612 | chr2:179436341;179436340;179436339 |
Novex-2 | 15967 | 48124;48125;48126 | chr2:178571614;178571613;178571612 | chr2:179436341;179436340;179436339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.007 | N | 0.172 | 0.248 | 0.112648838833 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88587E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0717 | likely_benign | 0.0702 | benign | -0.481 | Destabilizing | 0.012 | N | 0.059 | neutral | N | 0.400827699 | None | None | I |
S/C | 0.0974 | likely_benign | 0.0929 | benign | -0.213 | Destabilizing | 0.994 | D | 0.422 | neutral | N | 0.472725138 | None | None | I |
S/D | 0.555 | ambiguous | 0.5463 | ambiguous | 0.09 | Stabilizing | 0.742 | D | 0.294 | neutral | None | None | None | None | I |
S/E | 0.6488 | likely_pathogenic | 0.6319 | pathogenic | -0.013 | Destabilizing | 0.373 | N | 0.337 | neutral | None | None | None | None | I |
S/F | 0.2555 | likely_benign | 0.2319 | benign | -1.151 | Destabilizing | 0.979 | D | 0.485 | neutral | N | 0.515788 | None | None | I |
S/G | 0.1012 | likely_benign | 0.0949 | benign | -0.57 | Destabilizing | 0.543 | D | 0.357 | neutral | None | None | None | None | I |
S/H | 0.3988 | ambiguous | 0.3741 | ambiguous | -1.132 | Destabilizing | 0.953 | D | 0.436 | neutral | None | None | None | None | I |
S/I | 0.1676 | likely_benign | 0.1517 | benign | -0.372 | Destabilizing | 0.953 | D | 0.469 | neutral | None | None | None | None | I |
S/K | 0.7576 | likely_pathogenic | 0.7315 | pathogenic | -0.41 | Destabilizing | 0.59 | D | 0.288 | neutral | None | None | None | None | I |
S/L | 0.1032 | likely_benign | 0.0951 | benign | -0.372 | Destabilizing | 0.742 | D | 0.455 | neutral | None | None | None | None | I |
S/M | 0.184 | likely_benign | 0.1646 | benign | 0.044 | Stabilizing | 0.953 | D | 0.436 | neutral | None | None | None | None | I |
S/N | 0.1361 | likely_benign | 0.1265 | benign | -0.114 | Destabilizing | 0.742 | D | 0.364 | neutral | None | None | None | None | I |
S/P | 0.1151 | likely_benign | 0.1109 | benign | -0.381 | Destabilizing | 0.007 | N | 0.172 | neutral | N | 0.352975037 | None | None | I |
S/Q | 0.4922 | ambiguous | 0.455 | ambiguous | -0.417 | Destabilizing | 0.037 | N | 0.087 | neutral | None | None | None | None | I |
S/R | 0.7297 | likely_pathogenic | 0.7 | pathogenic | -0.199 | Destabilizing | 0.59 | D | 0.441 | neutral | None | None | None | None | I |
S/T | 0.0867 | likely_benign | 0.0803 | benign | -0.245 | Destabilizing | 0.472 | N | 0.347 | neutral | N | 0.433689479 | None | None | I |
S/V | 0.1554 | likely_benign | 0.1397 | benign | -0.381 | Destabilizing | 0.742 | D | 0.471 | neutral | None | None | None | None | I |
S/W | 0.461 | ambiguous | 0.4303 | ambiguous | -1.131 | Destabilizing | 0.996 | D | 0.508 | neutral | None | None | None | None | I |
S/Y | 0.2647 | likely_benign | 0.2458 | benign | -0.855 | Destabilizing | 0.979 | D | 0.493 | neutral | N | 0.472218159 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.