Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24841 | 74746;74747;74748 | chr2:178571611;178571610;178571609 | chr2:179436338;179436337;179436336 |
N2AB | 23200 | 69823;69824;69825 | chr2:178571611;178571610;178571609 | chr2:179436338;179436337;179436336 |
N2A | 22273 | 67042;67043;67044 | chr2:178571611;178571610;178571609 | chr2:179436338;179436337;179436336 |
N2B | 15776 | 47551;47552;47553 | chr2:178571611;178571610;178571609 | chr2:179436338;179436337;179436336 |
Novex-1 | 15901 | 47926;47927;47928 | chr2:178571611;178571610;178571609 | chr2:179436338;179436337;179436336 |
Novex-2 | 15968 | 48127;48128;48129 | chr2:178571611;178571610;178571609 | chr2:179436338;179436337;179436336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1382387828 | None | 0.892 | D | 0.781 | 0.5 | 0.728227171412 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9766 | likely_pathogenic | 0.9738 | pathogenic | -2.406 | Highly Destabilizing | 0.845 | D | 0.675 | prob.neutral | None | None | None | None | I |
I/C | 0.9781 | likely_pathogenic | 0.9747 | pathogenic | -1.826 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/D | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -2.536 | Highly Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | I |
I/E | 0.9956 | likely_pathogenic | 0.9953 | pathogenic | -2.481 | Highly Destabilizing | 0.987 | D | 0.831 | deleterious | None | None | None | None | I |
I/F | 0.9485 | likely_pathogenic | 0.9392 | pathogenic | -1.863 | Destabilizing | 0.967 | D | 0.746 | deleterious | D | 0.53753897 | None | None | I |
I/G | 0.997 | likely_pathogenic | 0.9965 | pathogenic | -2.799 | Highly Destabilizing | 0.987 | D | 0.829 | deleterious | None | None | None | None | I |
I/H | 0.9973 | likely_pathogenic | 0.997 | pathogenic | -2.011 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
I/K | 0.987 | likely_pathogenic | 0.9866 | pathogenic | -1.783 | Destabilizing | 0.987 | D | 0.829 | deleterious | None | None | None | None | I |
I/L | 0.4247 | ambiguous | 0.3936 | ambiguous | -1.343 | Destabilizing | 0.426 | N | 0.421 | neutral | N | 0.474819187 | None | None | I |
I/M | 0.6285 | likely_pathogenic | 0.5796 | pathogenic | -1.06 | Destabilizing | 0.983 | D | 0.705 | prob.neutral | D | 0.528717559 | None | None | I |
I/N | 0.9822 | likely_pathogenic | 0.9819 | pathogenic | -1.785 | Destabilizing | 0.994 | D | 0.833 | deleterious | D | 0.529731517 | None | None | I |
I/P | 0.9702 | likely_pathogenic | 0.9674 | pathogenic | -1.672 | Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | I |
I/Q | 0.9927 | likely_pathogenic | 0.9918 | pathogenic | -1.96 | Destabilizing | 0.996 | D | 0.828 | deleterious | None | None | None | None | I |
I/R | 0.983 | likely_pathogenic | 0.9821 | pathogenic | -1.121 | Destabilizing | 0.987 | D | 0.834 | deleterious | None | None | None | None | I |
I/S | 0.9834 | likely_pathogenic | 0.9819 | pathogenic | -2.424 | Highly Destabilizing | 0.983 | D | 0.807 | deleterious | D | 0.540327354 | None | None | I |
I/T | 0.947 | likely_pathogenic | 0.9452 | pathogenic | -2.244 | Highly Destabilizing | 0.892 | D | 0.781 | deleterious | D | 0.528971049 | None | None | I |
I/V | 0.0975 | likely_benign | 0.0975 | benign | -1.672 | Destabilizing | 0.011 | N | 0.242 | neutral | N | 0.494511438 | None | None | I |
I/W | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -2.016 | Highly Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
I/Y | 0.9934 | likely_pathogenic | 0.9926 | pathogenic | -1.799 | Destabilizing | 0.987 | D | 0.78 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.