Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24845 | 74758;74759;74760 | chr2:178571599;178571598;178571597 | chr2:179436326;179436325;179436324 |
N2AB | 23204 | 69835;69836;69837 | chr2:178571599;178571598;178571597 | chr2:179436326;179436325;179436324 |
N2A | 22277 | 67054;67055;67056 | chr2:178571599;178571598;178571597 | chr2:179436326;179436325;179436324 |
N2B | 15780 | 47563;47564;47565 | chr2:178571599;178571598;178571597 | chr2:179436326;179436325;179436324 |
Novex-1 | 15905 | 47938;47939;47940 | chr2:178571599;178571598;178571597 | chr2:179436326;179436325;179436324 |
Novex-2 | 15972 | 48139;48140;48141 | chr2:178571599;178571598;178571597 | chr2:179436326;179436325;179436324 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1214451388 | -1.452 | 0.889 | N | 0.412 | 0.133 | 0.542100083394 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 6.49E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.59E-05 | 0 |
I/L | rs1214451388 | -1.452 | 0.889 | N | 0.412 | 0.133 | 0.542100083394 | gnomAD-4.0.0 | 1.50576E-05 | None | None | None | None | N | None | 2.98954E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.6193E-05 | 0 | 4.97216E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7512 | likely_pathogenic | 0.7341 | pathogenic | -2.86 | Highly Destabilizing | 0.992 | D | 0.62 | neutral | None | None | None | None | N |
I/C | 0.8741 | likely_pathogenic | 0.8553 | pathogenic | -2.164 | Highly Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
I/D | 0.9851 | likely_pathogenic | 0.9813 | pathogenic | -3.362 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
I/E | 0.9487 | likely_pathogenic | 0.9382 | pathogenic | -3.164 | Highly Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/F | 0.4951 | ambiguous | 0.4303 | ambiguous | -1.734 | Destabilizing | 0.998 | D | 0.67 | neutral | N | 0.479825028 | None | None | N |
I/G | 0.9743 | likely_pathogenic | 0.9693 | pathogenic | -3.357 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/H | 0.8941 | likely_pathogenic | 0.8713 | pathogenic | -2.715 | Highly Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/K | 0.8929 | likely_pathogenic | 0.8721 | pathogenic | -2.262 | Highly Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
I/L | 0.3337 | likely_benign | 0.2844 | benign | -1.417 | Destabilizing | 0.889 | D | 0.412 | neutral | N | 0.468682532 | None | None | N |
I/M | 0.2625 | likely_benign | 0.2046 | benign | -1.386 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.495398068 | None | None | N |
I/N | 0.8403 | likely_pathogenic | 0.8144 | pathogenic | -2.579 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.470808899 | None | None | N |
I/P | 0.9949 | likely_pathogenic | 0.9952 | pathogenic | -1.881 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
I/Q | 0.8981 | likely_pathogenic | 0.8757 | pathogenic | -2.497 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
I/R | 0.818 | likely_pathogenic | 0.7883 | pathogenic | -1.823 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
I/S | 0.7232 | likely_pathogenic | 0.701 | pathogenic | -3.213 | Highly Destabilizing | 0.998 | D | 0.635 | neutral | N | 0.479251915 | None | None | N |
I/T | 0.3282 | likely_benign | 0.3254 | benign | -2.889 | Highly Destabilizing | 0.989 | D | 0.634 | neutral | N | 0.494601865 | None | None | N |
I/V | 0.074 | likely_benign | 0.0732 | benign | -1.881 | Destabilizing | 0.333 | N | 0.205 | neutral | N | 0.48532902 | None | None | N |
I/W | 0.9509 | likely_pathogenic | 0.932 | pathogenic | -2.125 | Highly Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/Y | 0.8561 | likely_pathogenic | 0.8242 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.