Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24872 | 74839;74840;74841 | chr2:178571518;178571517;178571516 | chr2:179436245;179436244;179436243 |
N2AB | 23231 | 69916;69917;69918 | chr2:178571518;178571517;178571516 | chr2:179436245;179436244;179436243 |
N2A | 22304 | 67135;67136;67137 | chr2:178571518;178571517;178571516 | chr2:179436245;179436244;179436243 |
N2B | 15807 | 47644;47645;47646 | chr2:178571518;178571517;178571516 | chr2:179436245;179436244;179436243 |
Novex-1 | 15932 | 48019;48020;48021 | chr2:178571518;178571517;178571516 | chr2:179436245;179436244;179436243 |
Novex-2 | 15999 | 48220;48221;48222 | chr2:178571518;178571517;178571516 | chr2:179436245;179436244;179436243 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs923165795 | 0.305 | 0.026 | N | 0.23 | 0.129 | 0.188950314367 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | I | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs923165795 | 0.305 | 0.026 | N | 0.23 | 0.129 | 0.188950314367 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
R/K | rs923165795 | 0.305 | 0.026 | N | 0.23 | 0.129 | 0.188950314367 | gnomAD-4.0.0 | 5.1278E-06 | None | None | None | None | I | None | 5.07666E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84592E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7249 | likely_pathogenic | 0.7383 | pathogenic | 0.099 | Stabilizing | 0.919 | D | 0.496 | neutral | None | None | None | None | I |
R/C | 0.291 | likely_benign | 0.3045 | benign | -0.074 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
R/D | 0.8569 | likely_pathogenic | 0.8698 | pathogenic | -0.252 | Destabilizing | 0.976 | D | 0.486 | neutral | None | None | None | None | I |
R/E | 0.755 | likely_pathogenic | 0.7677 | pathogenic | -0.211 | Destabilizing | 0.851 | D | 0.485 | neutral | None | None | None | None | I |
R/F | 0.7853 | likely_pathogenic | 0.8016 | pathogenic | -0.193 | Destabilizing | 0.988 | D | 0.611 | neutral | None | None | None | None | I |
R/G | 0.3836 | ambiguous | 0.4175 | ambiguous | -0.046 | Destabilizing | 0.896 | D | 0.487 | neutral | N | 0.398085677 | None | None | I |
R/H | 0.1287 | likely_benign | 0.1376 | benign | -0.573 | Destabilizing | 0.076 | N | 0.421 | neutral | None | None | None | None | I |
R/I | 0.7233 | likely_pathogenic | 0.7519 | pathogenic | 0.437 | Stabilizing | 0.984 | D | 0.595 | neutral | N | 0.481467188 | None | None | I |
R/K | 0.1665 | likely_benign | 0.1743 | benign | -0.017 | Destabilizing | 0.026 | N | 0.23 | neutral | N | 0.41442614 | None | None | I |
R/L | 0.5284 | ambiguous | 0.5592 | ambiguous | 0.437 | Stabilizing | 0.919 | D | 0.489 | neutral | None | None | None | None | I |
R/M | 0.621 | likely_pathogenic | 0.6469 | pathogenic | 0.006 | Stabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | I |
R/N | 0.6857 | likely_pathogenic | 0.7144 | pathogenic | 0.152 | Stabilizing | 0.919 | D | 0.498 | neutral | None | None | None | None | I |
R/P | 0.8178 | likely_pathogenic | 0.849 | pathogenic | 0.342 | Stabilizing | 0.988 | D | 0.545 | neutral | None | None | None | None | I |
R/Q | 0.1976 | likely_benign | 0.203 | benign | 0.089 | Stabilizing | 0.976 | D | 0.501 | neutral | None | None | None | None | I |
R/S | 0.7307 | likely_pathogenic | 0.7509 | pathogenic | -0.034 | Destabilizing | 0.896 | D | 0.507 | neutral | N | 0.479706983 | None | None | I |
R/T | 0.63 | likely_pathogenic | 0.6682 | pathogenic | 0.112 | Stabilizing | 0.896 | D | 0.482 | neutral | N | 0.46893234 | None | None | I |
R/V | 0.7764 | likely_pathogenic | 0.7935 | pathogenic | 0.342 | Stabilizing | 0.988 | D | 0.575 | neutral | None | None | None | None | I |
R/W | 0.3572 | ambiguous | 0.3704 | ambiguous | -0.367 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
R/Y | 0.5583 | ambiguous | 0.5903 | pathogenic | 0.038 | Stabilizing | 0.976 | D | 0.546 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.