Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24883 | 74872;74873;74874 | chr2:178571485;178571484;178571483 | chr2:179436212;179436211;179436210 |
N2AB | 23242 | 69949;69950;69951 | chr2:178571485;178571484;178571483 | chr2:179436212;179436211;179436210 |
N2A | 22315 | 67168;67169;67170 | chr2:178571485;178571484;178571483 | chr2:179436212;179436211;179436210 |
N2B | 15818 | 47677;47678;47679 | chr2:178571485;178571484;178571483 | chr2:179436212;179436211;179436210 |
Novex-1 | 15943 | 48052;48053;48054 | chr2:178571485;178571484;178571483 | chr2:179436212;179436211;179436210 |
Novex-2 | 16010 | 48253;48254;48255 | chr2:178571485;178571484;178571483 | chr2:179436212;179436211;179436210 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1191756557 | -3.492 | 0.892 | N | 0.671 | 0.556 | 0.696609645563 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1191756557 | -3.492 | 0.892 | N | 0.671 | 0.556 | 0.696609645563 | gnomAD-4.0.0 | 2.05317E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52793E-05 | None | 0 | 0 | 8.99606E-07 | 0 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9442 | likely_pathogenic | 0.9346 | pathogenic | -3.142 | Highly Destabilizing | 0.845 | D | 0.649 | neutral | None | None | None | None | N |
I/C | 0.9749 | likely_pathogenic | 0.9704 | pathogenic | -2.2 | Highly Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.827 | Highly Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | N |
I/E | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -3.519 | Highly Destabilizing | 0.987 | D | 0.865 | deleterious | None | None | None | None | N |
I/F | 0.8781 | likely_pathogenic | 0.8414 | pathogenic | -1.965 | Destabilizing | 0.967 | D | 0.573 | neutral | N | 0.511116602 | None | None | N |
I/G | 0.9968 | likely_pathogenic | 0.996 | pathogenic | -3.704 | Highly Destabilizing | 0.987 | D | 0.86 | deleterious | None | None | None | None | N |
I/H | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -3.283 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
I/K | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -2.55 | Highly Destabilizing | 0.987 | D | 0.867 | deleterious | None | None | None | None | N |
I/L | 0.6027 | likely_pathogenic | 0.5711 | pathogenic | -1.426 | Destabilizing | 0.426 | N | 0.277 | neutral | N | 0.476612705 | None | None | N |
I/M | 0.6584 | likely_pathogenic | 0.6159 | pathogenic | -1.523 | Destabilizing | 0.983 | D | 0.6 | neutral | N | 0.502976301 | None | None | N |
I/N | 0.9951 | likely_pathogenic | 0.9949 | pathogenic | -3.261 | Highly Destabilizing | 0.994 | D | 0.885 | deleterious | D | 0.529981326 | None | None | N |
I/P | 0.9975 | likely_pathogenic | 0.9968 | pathogenic | -1.994 | Destabilizing | 0.996 | D | 0.887 | deleterious | None | None | None | None | N |
I/Q | 0.9977 | likely_pathogenic | 0.9976 | pathogenic | -2.941 | Highly Destabilizing | 0.996 | D | 0.888 | deleterious | None | None | None | None | N |
I/R | 0.9955 | likely_pathogenic | 0.9955 | pathogenic | -2.482 | Highly Destabilizing | 0.987 | D | 0.886 | deleterious | None | None | None | None | N |
I/S | 0.9846 | likely_pathogenic | 0.9833 | pathogenic | -3.75 | Highly Destabilizing | 0.983 | D | 0.807 | deleterious | N | 0.518460436 | None | None | N |
I/T | 0.9467 | likely_pathogenic | 0.9403 | pathogenic | -3.296 | Highly Destabilizing | 0.892 | D | 0.671 | neutral | N | 0.50322979 | None | None | N |
I/V | 0.1015 | likely_benign | 0.1019 | benign | -1.994 | Destabilizing | 0.011 | N | 0.191 | neutral | N | 0.386878888 | None | None | N |
I/W | 0.9986 | likely_pathogenic | 0.9978 | pathogenic | -2.323 | Highly Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
I/Y | 0.9927 | likely_pathogenic | 0.991 | pathogenic | -2.207 | Highly Destabilizing | 0.987 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.