Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24886 | 74881;74882;74883 | chr2:178571476;178571475;178571474 | chr2:179436203;179436202;179436201 |
N2AB | 23245 | 69958;69959;69960 | chr2:178571476;178571475;178571474 | chr2:179436203;179436202;179436201 |
N2A | 22318 | 67177;67178;67179 | chr2:178571476;178571475;178571474 | chr2:179436203;179436202;179436201 |
N2B | 15821 | 47686;47687;47688 | chr2:178571476;178571475;178571474 | chr2:179436203;179436202;179436201 |
Novex-1 | 15946 | 48061;48062;48063 | chr2:178571476;178571475;178571474 | chr2:179436203;179436202;179436201 |
Novex-2 | 16013 | 48262;48263;48264 | chr2:178571476;178571475;178571474 | chr2:179436203;179436202;179436201 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1239424185 | -0.507 | 0.999 | N | 0.462 | 0.38 | 0.326616659874 | gnomAD-4.0.0 | 1.36875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7992E-06 | 0 | 0 |
E/Q | None | None | 1.0 | N | 0.573 | 0.252 | 0.278143212241 | gnomAD-4.0.0 | 1.36875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7126 | likely_pathogenic | 0.6542 | pathogenic | -0.552 | Destabilizing | 0.999 | D | 0.61 | neutral | N | 0.475595066 | None | None | N |
E/C | 0.9776 | likely_pathogenic | 0.9722 | pathogenic | -0.559 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/D | 0.9467 | likely_pathogenic | 0.9399 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.421 | neutral | N | 0.512514819 | None | None | N |
E/F | 0.9901 | likely_pathogenic | 0.9857 | pathogenic | -0.979 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
E/G | 0.858 | likely_pathogenic | 0.8307 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.530619074 | None | None | N |
E/H | 0.9771 | likely_pathogenic | 0.968 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.8804 | likely_pathogenic | 0.8387 | pathogenic | 0.28 | Stabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
E/K | 0.7838 | likely_pathogenic | 0.7394 | pathogenic | -0.789 | Destabilizing | 0.999 | D | 0.462 | neutral | N | 0.475456935 | None | None | N |
E/L | 0.9548 | likely_pathogenic | 0.9379 | pathogenic | 0.28 | Stabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/M | 0.8926 | likely_pathogenic | 0.8567 | pathogenic | 0.717 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/N | 0.9615 | likely_pathogenic | 0.9522 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/P | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | 0.024 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Q | 0.4158 | ambiguous | 0.3548 | ambiguous | -0.868 | Destabilizing | 1.0 | D | 0.573 | neutral | N | 0.468113101 | None | None | N |
E/R | 0.8768 | likely_pathogenic | 0.8448 | pathogenic | -0.852 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/S | 0.8259 | likely_pathogenic | 0.7859 | pathogenic | -1.427 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | N |
E/T | 0.8358 | likely_pathogenic | 0.7853 | pathogenic | -1.146 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/V | 0.709 | likely_pathogenic | 0.6288 | pathogenic | 0.024 | Stabilizing | 1.0 | D | 0.786 | deleterious | N | 0.469852562 | None | None | N |
E/W | 0.9973 | likely_pathogenic | 0.9964 | pathogenic | -1.238 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
E/Y | 0.9882 | likely_pathogenic | 0.9836 | pathogenic | -0.831 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.