Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24894 | 74905;74906;74907 | chr2:178571452;178571451;178571450 | chr2:179436179;179436178;179436177 |
N2AB | 23253 | 69982;69983;69984 | chr2:178571452;178571451;178571450 | chr2:179436179;179436178;179436177 |
N2A | 22326 | 67201;67202;67203 | chr2:178571452;178571451;178571450 | chr2:179436179;179436178;179436177 |
N2B | 15829 | 47710;47711;47712 | chr2:178571452;178571451;178571450 | chr2:179436179;179436178;179436177 |
Novex-1 | 15954 | 48085;48086;48087 | chr2:178571452;178571451;178571450 | chr2:179436179;179436178;179436177 |
Novex-2 | 16021 | 48286;48287;48288 | chr2:178571452;178571451;178571450 | chr2:179436179;179436178;179436177 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.954 | N | 0.515 | 0.092 | 0.273503213844 | gnomAD-4.0.0 | 3.18406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.3092 | likely_benign | 0.3222 | benign | -2.277 | Highly Destabilizing | 0.345 | N | 0.449 | neutral | None | None | None | None | N |
Y/C | 0.1212 | likely_benign | 0.1292 | benign | -0.846 | Destabilizing | 0.007 | N | 0.468 | neutral | N | 0.473731734 | None | None | N |
Y/D | 0.504 | ambiguous | 0.5371 | ambiguous | -0.999 | Destabilizing | 0.662 | D | 0.6 | neutral | N | 0.473731734 | None | None | N |
Y/E | 0.8 | likely_pathogenic | 0.8152 | pathogenic | -0.884 | Destabilizing | 0.561 | D | 0.558 | neutral | None | None | None | None | N |
Y/F | 0.0729 | likely_benign | 0.0702 | benign | -0.861 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.441092667 | None | None | N |
Y/G | 0.3366 | likely_benign | 0.3488 | ambiguous | -2.618 | Highly Destabilizing | 0.561 | D | 0.56 | neutral | None | None | None | None | N |
Y/H | 0.2356 | likely_benign | 0.2554 | benign | -0.947 | Destabilizing | 0.954 | D | 0.515 | neutral | N | 0.511974117 | None | None | N |
Y/I | 0.4604 | ambiguous | 0.4585 | ambiguous | -1.224 | Destabilizing | 0.209 | N | 0.42 | neutral | None | None | None | None | N |
Y/K | 0.8493 | likely_pathogenic | 0.8521 | pathogenic | -1.089 | Destabilizing | 0.561 | D | 0.547 | neutral | None | None | None | None | N |
Y/L | 0.4493 | ambiguous | 0.4207 | ambiguous | -1.224 | Destabilizing | 0.002 | N | 0.283 | neutral | None | None | None | None | N |
Y/M | 0.6061 | likely_pathogenic | 0.5948 | pathogenic | -0.842 | Destabilizing | 0.818 | D | 0.525 | neutral | None | None | None | None | N |
Y/N | 0.2656 | likely_benign | 0.2929 | benign | -1.485 | Destabilizing | 0.873 | D | 0.631 | neutral | N | 0.473478244 | None | None | N |
Y/P | 0.2939 | likely_benign | 0.3179 | benign | -1.573 | Destabilizing | 0.002 | N | 0.544 | neutral | None | None | None | None | N |
Y/Q | 0.6991 | likely_pathogenic | 0.7136 | pathogenic | -1.38 | Destabilizing | 0.901 | D | 0.555 | neutral | None | None | None | None | N |
Y/R | 0.7315 | likely_pathogenic | 0.7347 | pathogenic | -0.698 | Destabilizing | 0.901 | D | 0.631 | neutral | None | None | None | None | N |
Y/S | 0.1581 | likely_benign | 0.1745 | benign | -2.04 | Highly Destabilizing | 0.491 | N | 0.548 | neutral | N | 0.471703817 | None | None | N |
Y/T | 0.4188 | ambiguous | 0.4242 | ambiguous | -1.825 | Destabilizing | 0.561 | D | 0.541 | neutral | None | None | None | None | N |
Y/V | 0.3397 | likely_benign | 0.3407 | ambiguous | -1.573 | Destabilizing | 0.007 | N | 0.292 | neutral | None | None | None | None | N |
Y/W | 0.3328 | likely_benign | 0.327 | benign | -0.38 | Destabilizing | 0.965 | D | 0.544 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.